Gene
| Gene Model ID | pfu_aug1.0_161.1_43519 |
|---|---|
| Locus | scaffold161.1 : 57536 ... 63536 : + |
| To GenomeBrowser | scaffold161.1:57536..63536 |
| Genes list of scaffold | scaffold161.1 |
| Synonym | pfu_aug2.0_290.1_00557 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_161.1_43519.t1 | 2 | 1 | Neur_chan_LBD | 83 | 156 | 2.8026e-45 | 153.8 | 1.3e-16 | 9.3e-13 | 47.8 |
| pfu_aug1.0_161.1_43519.t1 | 2 | 2 | Neur_chan_LBD | 160 | 274 | 2.8026e-45 | 153.8 | 1.1e-34 | 8.0e-31 | 106.8 |
| pfu_aug1.0_161.1_43519.t1 | 1 | 1 | Neur_chan_memb | 281 | 506 | 0.0 | 164.5 | 0.0 | 0.0 | 164.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_161.1_43519.t1 | gi|77020768|gb|ABA60386.1| | nicotinic acetylcholine receptor subunit type G [Lymnaea stagnalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_161.1_43519.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_161.1_43519.t1 atgaccttgaccttcgagaaagtcatcatctctagtaaccttgccaccaggcatcttttggttcatactctaaacgtttg tttttattttcaatacccgcaagattcagtggcatatagtttttgtcctgtctgtctacttttccgttgctacaagaagt ttgaccttgtgaccttggagtttgacctacttttgaaaactttaacattggctttaattcttgaatgaaatattgtcaat gcatttcaggagtggtttgacgagagactgatatggaatcctaaagattataatggactagaaaccattcgcattccatg tgacaaaatatggcttcctgacgtcgtgttatacaacagcgaagagataatatgtcgaagtggtttcatcccatattata tggatacggaatccctttgtactattatcaagtcattaagtggtaacgtacgagacatttgtaaagttaaacacaacgct gatgattttacagcgggctacatgcaaagcaaagcaatggttcggtacgatggcaatgtattttggccaccccctgcaaa gttcagaagttcctgtacgatagacataacgtattttcccttcgatgatcagatctgcaaaatgaaatttggttcatgga cttatgacggcacccaagttgatttggtgaaccgatcaaccttcgtcgatctgtcaaactacgtgtacagtggcgaatgg gaacttttagacattcgtgtgataagaaacgaagtattttacgcatgctgtgatatcccctaccctgatgtgacattcac cattgtcatgcgcaggaagaccttatattaccttttcaatatcatatttccttgcctatggctaaccatcctcagcttac tgggattctggcttcctccagacagcggagagaagataactcttggtatcacggtattactggcgttctccgtatttatg ctccttattgctgaaaatatgcctgctacgtcagagtttgttccccttattggtatatatctgacggtcaccatgggtat gacatccttgtccattattttaactgtgtttgtccttcaaattcatcatgtcggtccacatcaaagaccggtcccccgct ggttaaggtttctttgttttaaaattctcgccaggatgatgtgcatgaaagttcctgcaatacctcagctttataaaaac tatttccaaaatgaagacatgtgtctgacgtcatttgtagaaacagttgataccggaacaggaaattgtaatggtaatat tcaccaaaatgctaccacgcatgtgctgaaaaactataaaaaggacatgtacagtgatgttgaaagggacgtcactcatc agaaaataacaaatcacttaaaagtgctcgtagagaaacaagactatgaagaaaatcaccagacaatagtgcacgagtgg cagtttgtggcacatgttatggatagaatattgttttggatctttctttttgctgcaatcttatcttccttaatgatatt agttgttcaacctttacgtaaaccaaacgtatga |
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Protein
| Protein ID | pfu_aug1.0_161.1_43519.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_161.1_43519.t1 MTLTFEKVIISSNLATRHLLVHTLNVCFYFQYPQDSVAYSFCPVCLLFRCYKKFDLVTLEFDLLLKTLTLALILEXNIVN AFQEWFDERLIWNPKDYNGLETIRIPCDKIWLPDVVLYNSEEIICRSGFIPYYMDTESLCTIIKSLSGNVRDICKVKHNA DDFTAGYMQSKAMVRYDGNVFWPPPAKFRSSCTIDITYFPFDDQICKMKFGSWTYDGTQVDLVNRSTFVDLSNYVYSGEW ELLDIRVIRNEVFYACCDIPYPDVTFTIVMRRKTLYYLFNIIFPCLWLTILSLLGFWLPPDSGEKITLGITVLLAFSVFM LLIAENMPATSEFVPLIGIYLTVTMGMTSLSIILTVFVLQIHHVGPHQRPVPRWLRFLCFKILARMMCMKVPAIPQLYKN YFQNEDMCLTSFVETVDTGTGNCNGNIHQNATTHVLKNYKKDMYSDVERDVTHQKITNHLKVLVEKQDYEENHQTIVHEW QFVAHVMDRILFWIFLFAAILSSLMILVVQPLRKPNV |
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