Gene
| Gene Model ID | pfu_aug1.0_16135.1_18314 |
|---|---|
| Locus | scaffold16135.1 : 20386 ... 25535 : + |
| To GenomeBrowser | scaffold16135.1:20386..25535 |
| Genes list of scaffold | scaffold16135.1 |
| Synonym | pfu_aug2.0_540.1_00857 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16135.1_18314.t1 | 1 | 1 | RRM_1 | 107 | 168 | 2.8e-15 | 55.6 | 8.2e-19 | 6.1e-15 | 54.6 |
| pfu_aug1.0_16135.1_18314.t1 | 1 | 1 | RRM_6 | 107 | 172 | 1.7e-10 | 40.7 | 4.2e-14 | 3.1e-10 | 39.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16135.1_18314.t1 | gi|242023524|ref|XP_002432182.1| | Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus humanus corporis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_16135.1_18314.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16135.1_18314.t1 atgtctcagtacattcaggtagctgaagatgaaattgaggagccaattgaaattcccagtgaagaggatgggtcactctt gttaacaacacttggagcacagtttcctggtgcctgtggaatgaaatatagaaatcctgccactgggaacttcaggggta taagactgtctgaaggacgcttgcatccaccggacggtgtctggggacacttcatttatatagtagtgtttccaaaagaa aacaaaagaaaaggagatgaagcagttgagaatccgcatgccaaaacaaaatgtttggataaacagagatgtagtgacct tattgtactagggctgccctggaagagtactgaggatgatctacgtagatacttcagtggttacggagatctactcttag ttcaggtaaagagagatgtcaaaacaggacagtcaaaaggatttggattcatcaggtttgccgagtatgaatcacaggcc aaagttgtatcacagcgacatctcatagacgggcgatggtgtgacgtcactattccaaactcaaacgtgagcactaatgt tgggaacctctga |
|
Protein
| Protein ID | pfu_aug1.0_16135.1_18314.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16135.1_18314.t1 MSQYIQVAEDEIEEPIEIPSEEDGSLLLTTLGAQFPGACGMKYRNPATGNFRGIRLSEGRLHPPDGVWGHFIYIVVFPKE NKRKGDEAVENPHAKTKCLDKQRCSDLIVLGLPWKSTEDDLRRYFSGYGDLLLVQVKRDVKTGQSKGFGFIRFAEYESQA KVVSQRHLIDGRWCDVTIPNSNVSTNVGNL |
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