Gene
| Gene Model ID | pfu_aug1.0_1614.1_22681 |
|---|---|
| Locus | scaffold1614.1 : 29386 ... 42611 : + |
| To GenomeBrowser | scaffold1614.1:29386..42611 |
| Genes list of scaffold | scaffold1614.1 |
| Synonym | pfu_aug2.0_170.1_00364 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1614.1_22681.t1 | 1 | 1 | Ricin_B_lectin | 146 | 213 | 5.8e-06 | 26.3 | 8.0e-10 | 1.2e-05 | 25.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1614.1_22681.t1 | gi|156351115|ref|XP_001622369.1| | hypothetical protein NEMVEDRAFT_v1g141560 [Nematostella vectensis] | 5.60519e-45 |
Transcript
| Transcript ID | pfu_aug1.0_1614.1_22681.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1614.1_22681.t1 atggatcctcttgtagtagccgtgccattacttgacactatatcttcatcatcccttcagttgtcgccaacagatccaaa gatgattggcgagctatcactacgtacttggatgtgtggaggatctatagagattcttccctgtagtcgtataggacata ttttccgtaagcgtcatccttacacatttccagatgatagtaccagtatgtatatcagaaatgcaaggagggtggcagag gtctggatggatgaatataaacgttttttctacacgcagcgccccactgccagactaaaaccttacggcagtgttgcaga caggaaaaagttacgacaacagttgaaatgtcagtctttcaaatggtacctccaaactgtctacacccagctcaggtcac cagtgatagatgagttagcgtatggtatgatccagcaggacggactatgtatggacatcgatccaggtcatgtacctgta attaccaaacttaacacctgttcagatcaaagaagctctcaggaatggttttggaagaagagtgggaaaattataagtaa tggcatgtgtctcagtgctgatgtaaaggagacgcatggctatgtactgatacagtactgtagtggagctgataaccagt gtcatgatgacgaattcaattttggacaacttttttga |
|
Protein
| Protein ID | pfu_aug1.0_1614.1_22681.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1614.1_22681.t1 MDPLVVAVPLLDTISSSSLQLSPTDPKMIGELSLRTWMCGGSIEILPCSRIGHIFRKRHPYTFPDDSTSMYIRNARRVAE VWMDEYKRFFYTQRPTARLKPYGSVADRKKLRQQLKCQSFKWYLQTVYTQLRSPVIDELAYGMIQQDGLCMDIDPGHVPV ITKLNTCSDQRSSQEWFWKKSGKIISNGMCLSADVKETHGYVLIQYCSGADNQCHDDEFNFGQLF |
|