Gene
Gene Model ID | pfu_aug1.0_16140.1_03676 |
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Locus | scaffold16140.1 : 10246 ... 18910 : + |
To GenomeBrowser | scaffold16140.1:10246..18910 |
Genes list of scaffold | scaffold16140.1 |
Synonym | pfu_aug2.0_403.1_10736 |
Manual annotation
Study field | Biomineralization |
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Gene name | frizzled-5/8 |
Description | NCBI BLASTP hit to gb|ADZ61652.1|? [Ptychodera flava] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_16140.1_03676.t2 | 1 | 1 | Fz | 37 | 149 | 5.9e-35 | 120.1 | 2.2e-38 | 1.6e-34 | 118.7 |
pfu_aug1.0_16140.1_03676.t2 | 1 | 1 | Frizzled | 254 | 560 | 0.0 | 464.5 | 0.0 | 0.0 | 463.9 |
Transcript
Transcript ID | pfu_aug1.0_16140.1_03676.t1 |
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Definition | - |
>pfu_aug1.0_16140.1_03676.t1 atggcaattttacactcgtctccgggatgtgtacttttagtattaggggtattaactttggcatgtttgaattgctggtt agaagtgaatggcgaagacgatcgacgatgtcaagatatcaccatacccatgtgtaaaggaatcgggtataaccttacgt acatgcccaaccagttcaatcatgagacgcaagaagaagctgggttagaagtccatcagttttggccattagtggagatt cagtgttcaccggatctgaagcttttcctatgcagtatgtacactccaatctgtatgccgacgtacaagaagccacttcc ggcatgtcggtccgtctgtgagcgcgctaaggaaggatgcgctcctctgatggcgcaatatggattccaatggccggaaa gaatgaagtgtgagaatttaccggaatatggaacggaggtttgcatggatccgaataacaccgaaaaatctacaccgtca tcaaccaagggagacgggcatacacataaacctcacggtcataataaaccggacaccaaaccgaagaatcctgtgaaatc gaagaatccgctaaaaccgcacataccggatattacgggttataccgttcggccgaatggcgggattttcgattttcacg acgtcgcaagtaaagcttgccagtgttcgtgtaagatggtgaccttgcctaaaaccagtgcgtactacaacaaaattacc acgggtggaatcagtaactgcgcattgaactgtaccagcccatatttcaatgatgatgaaatgacatttgcgaccttctg ggtcggattgtggtcgattttgtgttgtattgcaacggccatgacggtactgacatttttcgttgacatgcaaagattca agtacccagagcgccctatcgtattcctaagcggctgttatttcatggtaagcataggctacattattcggctcatcgtc ggccatcaggcggtggcatgcgacggaaattcaatccgttacgaaacaacaggacctgcgctgtgcacggtagtcttctt actgatttactttttcggaatggcgtcatccatttggtgggtgattttatcgtttacgtggttcctgtctgcaggtttga agtggggacaggaagccatcgccagctattcccagtactttcatctcgccgcttggctagtcccttctgtaaagagcatc gccgtactagcgatgtcatcggtggacggtgacgcaatttccggtatatgctacgtcggaaatcaaaatctgaacaatct ccgaggctttgtcattgcgccattgtttgtttatttactcctcggcacttccttcctggttgcaggatttgtctcccttt tccggatccgaaacgtaatcaaacaacagggtcgtggaacgactgataaacttgaaaaactgatgatccggatcggagtt ttttcggtgctttataccgtgccagcaacgattgtgattggttgttatttttatgaacaacatctcaaagaaaaatggga attatcgagaaattgtaactgtttggaaaatgtatataaaccaaattatgccgtttttatgttgaaatactttatgtgtt tagtcgtgggtattacttccggtttctggatttggaccggaaagactcttcagtcatggaggaaattatttaactgttgt cgaaatacaaatgatagctttacgtcaaagcacacaaagtcaacgaactactcttatccaggtgtcaaagcggtaccgct tagtcaggtttag |
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Transcript ID | pfu_aug1.0_16140.1_03676.t2 |
Definition | - |
>pfu_aug1.0_16140.1_03676.t2 atggcaattttacactcgtctccgggatgtgtacttttagtattaggggtattaactttggcatgtttgaattgctggtt agaagtgaatggcgaagacgatcgacgatgtcaagatatcaccatacccatgtgtaaaggaatcgggtataaccttacgt acatgcccaaccagttcaatcatgagacgcaagaagaagctgggttagaagtccatcagttttggccattagtggagatt cagtgttcaccggatctgaagcttttcctatgcagtatgtacactccaatctgtatgccgacgtacaagaagccacttcc ggcatgtcggtccgtctgtgagcgcgctaaggaaggatgcgctcctctgatggcgcaatatggattccaatggccggaaa gaatgaagtgtgagaatttaccggaatatggaacggaggtttgcatggatccgaataacaccgaaaaatctacaccgtca tcaaccaagggagacgggcatacacataaacctcacggtcataataaaccggacaccaaaccgaagaatcctgtgaaatc gaagaatccgctaaaaccgcacataccggatattacgggttataccgttcggccgaatggcgggattttcgattttcacg acgtcgcaagtaaagcttgccagtgttcgtgtaagatggtgaccttgcctaaaaccagtgcgtactacaacaaaattacc acgggtggaatcagtaactgcgcattgaactgtaccagcccatatttcaatgatgatgaaatgacatttgcgaccttctg ggtcggattgtggtcgattttgtgttgtattgcaacggccatgacggtactgacatttttcgttgacatgcaaagattca agtacccagagcgccctatcgtattcctaagcggctgttatttcatggtaagcataggctacattattcggctcatcgtc ggccatcaggcggtggcatgcgacggaaattcaatccgttacgaaacaacaggacctgcgctgtgcacggtagtcttctt actgatttactttttcggaatggcgtcatccatttggtgggtgattttatcgtttacgtggttcctgtctgcaggtttga agtggggacaggaagccatcgccagctattcccagtactttcatctcgccgcttggctagtcccttctgtaaagagcatc gccgtactagcgatgtcatcggtggacggtgacgcaatttccggtatatgctacgtcggaaatcaaaatctgaacaatct ccgaggctttgtcattgcgccattgtttgtttatttactcctcggcacttccttcctggttgcaggatttgtctcccttt tccggatccgaaacgtaatcaaacaacagggtcgtggaacgactgataaacttgaaaaactgatgatccggatcggagtt ttttcggtgctttataccgtgccagcaacgattgtgattggttgttatttttatgaacaacatctcaaagaaaaatggga attatcgagaaattgtaactgtttggaaaatgtatataaaccaaattatgccgtttttatgttgaaatactttatgtgtt tagtcgtgggtattacttccggtttctggatttggaccggaaagactcttcagtcatggaggaaattatttaactgttgt cgaaatacaaatgatagctttacgtcaaagcacacaaagtcaacgaactactcttatccaggtgtcaaagcggtaccgct tagtcaggtttag |
Protein
Protein ID | pfu_aug1.0_16140.1_03676.t1 |
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Definition | - |
>pfu_aug1.0_16140.1_03676.t1 MAILHSSPGCVLLVLGVLTLACLNCWLEVNGEDDRRCQDITIPMCKGIGYNLTYMPNQFNHETQEEAGLEVHQFWPLVEI QCSPDLKLFLCSMYTPICMPTYKKPLPACRSVCERAKEGCAPLMAQYGFQWPERMKCENLPEYGTEVCMDPNNTEKSTPS STKGDGHTHKPHGHNKPDTKPKNPVKSKNPLKPHIPDITGYTVRPNGGIFDFHDVASKACQCSCKMVTLPKTSAYYNKIT TGGISNCALNCTSPYFNDDEMTFATFWVGLWSILCCIATAMTVLTFFVDMQRFKYPERPIVFLSGCYFMVSIGYIIRLIV GHQAVACDGNSIRYETTGPALCTVVFLLIYFFGMASSIWWVILSFTWFLSAGLKWGQEAIASYSQYFHLAAWLVPSVKSI AVLAMSSVDGDAISGICYVGNQNLNNLRGFVIAPLFVYLLLGTSFLVAGFVSLFRIRNVIKQQGRGTTDKLEKLMIRIGV FSVLYTVPATIVIGCYFYEQHLKEKWELSRNCNCLENVYKPNYAVFMLKYFMCLVVGITSGFWIWTGKTLQSWRKLFNCC RNTNDSFTSKHTKSTNYSYPGVKAVPLSQV |
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Protein ID | pfu_aug1.0_16140.1_03676.t2 |
Definition | - |
>pfu_aug1.0_16140.1_03676.t2 MAILHSSPGCVLLVLGVLTLACLNCWLEVNGEDDRRCQDITIPMCKGIGYNLTYMPNQFNHETQEEAGLEVHQFWPLVEI QCSPDLKLFLCSMYTPICMPTYKKPLPACRSVCERAKEGCAPLMAQYGFQWPERMKCENLPEYGTEVCMDPNNTEKSTPS STKGDGHTHKPHGHNKPDTKPKNPVKSKNPLKPHIPDITGYTVRPNGGIFDFHDVASKACQCSCKMVTLPKTSAYYNKIT TGGISNCALNCTSPYFNDDEMTFATFWVGLWSILCCIATAMTVLTFFVDMQRFKYPERPIVFLSGCYFMVSIGYIIRLIV GHQAVACDGNSIRYETTGPALCTVVFLLIYFFGMASSIWWVILSFTWFLSAGLKWGQEAIASYSQYFHLAAWLVPSVKSI AVLAMSSVDGDAISGICYVGNQNLNNLRGFVIAPLFVYLLLGTSFLVAGFVSLFRIRNVIKQQGRGTTDKLEKLMIRIGV FSVLYTVPATIVIGCYFYEQHLKEKWELSRNCNCLENVYKPNYAVFMLKYFMCLVVGITSGFWIWTGKTLQSWRKLFNCC RNTNDSFTSKHTKSTNYSYPGVKAVPLSQV |