Gene
| Gene Model ID | pfu_aug1.0_16140.1_03676 |
|---|---|
| Locus | scaffold16140.1 : 10246 ... 18910 : + |
| To GenomeBrowser | scaffold16140.1:10246..18910 |
| Genes list of scaffold | scaffold16140.1 |
| Synonym | pfu_aug2.0_403.1_10736 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | frizzled-5/8 |
| Description | NCBI BLASTP hit to gb|ADZ61652.1|? [Ptychodera flava] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16140.1_03676.t2 | 1 | 1 | Fz | 37 | 149 | 5.9e-35 | 120.1 | 2.2e-38 | 1.6e-34 | 118.7 |
| pfu_aug1.0_16140.1_03676.t2 | 1 | 1 | Frizzled | 254 | 560 | 0.0 | 464.5 | 0.0 | 0.0 | 463.9 |
Transcript
| Transcript ID | pfu_aug1.0_16140.1_03676.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16140.1_03676.t1 atggcaattttacactcgtctccgggatgtgtacttttagtattaggggtattaactttggcatgtttgaattgctggtt agaagtgaatggcgaagacgatcgacgatgtcaagatatcaccatacccatgtgtaaaggaatcgggtataaccttacgt acatgcccaaccagttcaatcatgagacgcaagaagaagctgggttagaagtccatcagttttggccattagtggagatt cagtgttcaccggatctgaagcttttcctatgcagtatgtacactccaatctgtatgccgacgtacaagaagccacttcc ggcatgtcggtccgtctgtgagcgcgctaaggaaggatgcgctcctctgatggcgcaatatggattccaatggccggaaa gaatgaagtgtgagaatttaccggaatatggaacggaggtttgcatggatccgaataacaccgaaaaatctacaccgtca tcaaccaagggagacgggcatacacataaacctcacggtcataataaaccggacaccaaaccgaagaatcctgtgaaatc gaagaatccgctaaaaccgcacataccggatattacgggttataccgttcggccgaatggcgggattttcgattttcacg acgtcgcaagtaaagcttgccagtgttcgtgtaagatggtgaccttgcctaaaaccagtgcgtactacaacaaaattacc acgggtggaatcagtaactgcgcattgaactgtaccagcccatatttcaatgatgatgaaatgacatttgcgaccttctg ggtcggattgtggtcgattttgtgttgtattgcaacggccatgacggtactgacatttttcgttgacatgcaaagattca agtacccagagcgccctatcgtattcctaagcggctgttatttcatggtaagcataggctacattattcggctcatcgtc ggccatcaggcggtggcatgcgacggaaattcaatccgttacgaaacaacaggacctgcgctgtgcacggtagtcttctt actgatttactttttcggaatggcgtcatccatttggtgggtgattttatcgtttacgtggttcctgtctgcaggtttga agtggggacaggaagccatcgccagctattcccagtactttcatctcgccgcttggctagtcccttctgtaaagagcatc gccgtactagcgatgtcatcggtggacggtgacgcaatttccggtatatgctacgtcggaaatcaaaatctgaacaatct ccgaggctttgtcattgcgccattgtttgtttatttactcctcggcacttccttcctggttgcaggatttgtctcccttt tccggatccgaaacgtaatcaaacaacagggtcgtggaacgactgataaacttgaaaaactgatgatccggatcggagtt ttttcggtgctttataccgtgccagcaacgattgtgattggttgttatttttatgaacaacatctcaaagaaaaatggga attatcgagaaattgtaactgtttggaaaatgtatataaaccaaattatgccgtttttatgttgaaatactttatgtgtt tagtcgtgggtattacttccggtttctggatttggaccggaaagactcttcagtcatggaggaaattatttaactgttgt cgaaatacaaatgatagctttacgtcaaagcacacaaagtcaacgaactactcttatccaggtgtcaaagcggtaccgct tagtcaggtttag |
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| Transcript ID | pfu_aug1.0_16140.1_03676.t2 |
| Definition | - |
>pfu_aug1.0_16140.1_03676.t2 atggcaattttacactcgtctccgggatgtgtacttttagtattaggggtattaactttggcatgtttgaattgctggtt agaagtgaatggcgaagacgatcgacgatgtcaagatatcaccatacccatgtgtaaaggaatcgggtataaccttacgt acatgcccaaccagttcaatcatgagacgcaagaagaagctgggttagaagtccatcagttttggccattagtggagatt cagtgttcaccggatctgaagcttttcctatgcagtatgtacactccaatctgtatgccgacgtacaagaagccacttcc ggcatgtcggtccgtctgtgagcgcgctaaggaaggatgcgctcctctgatggcgcaatatggattccaatggccggaaa gaatgaagtgtgagaatttaccggaatatggaacggaggtttgcatggatccgaataacaccgaaaaatctacaccgtca tcaaccaagggagacgggcatacacataaacctcacggtcataataaaccggacaccaaaccgaagaatcctgtgaaatc gaagaatccgctaaaaccgcacataccggatattacgggttataccgttcggccgaatggcgggattttcgattttcacg acgtcgcaagtaaagcttgccagtgttcgtgtaagatggtgaccttgcctaaaaccagtgcgtactacaacaaaattacc acgggtggaatcagtaactgcgcattgaactgtaccagcccatatttcaatgatgatgaaatgacatttgcgaccttctg ggtcggattgtggtcgattttgtgttgtattgcaacggccatgacggtactgacatttttcgttgacatgcaaagattca agtacccagagcgccctatcgtattcctaagcggctgttatttcatggtaagcataggctacattattcggctcatcgtc ggccatcaggcggtggcatgcgacggaaattcaatccgttacgaaacaacaggacctgcgctgtgcacggtagtcttctt actgatttactttttcggaatggcgtcatccatttggtgggtgattttatcgtttacgtggttcctgtctgcaggtttga agtggggacaggaagccatcgccagctattcccagtactttcatctcgccgcttggctagtcccttctgtaaagagcatc gccgtactagcgatgtcatcggtggacggtgacgcaatttccggtatatgctacgtcggaaatcaaaatctgaacaatct ccgaggctttgtcattgcgccattgtttgtttatttactcctcggcacttccttcctggttgcaggatttgtctcccttt tccggatccgaaacgtaatcaaacaacagggtcgtggaacgactgataaacttgaaaaactgatgatccggatcggagtt ttttcggtgctttataccgtgccagcaacgattgtgattggttgttatttttatgaacaacatctcaaagaaaaatggga attatcgagaaattgtaactgtttggaaaatgtatataaaccaaattatgccgtttttatgttgaaatactttatgtgtt tagtcgtgggtattacttccggtttctggatttggaccggaaagactcttcagtcatggaggaaattatttaactgttgt cgaaatacaaatgatagctttacgtcaaagcacacaaagtcaacgaactactcttatccaggtgtcaaagcggtaccgct tagtcaggtttag |
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Protein
| Protein ID | pfu_aug1.0_16140.1_03676.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16140.1_03676.t1 MAILHSSPGCVLLVLGVLTLACLNCWLEVNGEDDRRCQDITIPMCKGIGYNLTYMPNQFNHETQEEAGLEVHQFWPLVEI QCSPDLKLFLCSMYTPICMPTYKKPLPACRSVCERAKEGCAPLMAQYGFQWPERMKCENLPEYGTEVCMDPNNTEKSTPS STKGDGHTHKPHGHNKPDTKPKNPVKSKNPLKPHIPDITGYTVRPNGGIFDFHDVASKACQCSCKMVTLPKTSAYYNKIT TGGISNCALNCTSPYFNDDEMTFATFWVGLWSILCCIATAMTVLTFFVDMQRFKYPERPIVFLSGCYFMVSIGYIIRLIV GHQAVACDGNSIRYETTGPALCTVVFLLIYFFGMASSIWWVILSFTWFLSAGLKWGQEAIASYSQYFHLAAWLVPSVKSI AVLAMSSVDGDAISGICYVGNQNLNNLRGFVIAPLFVYLLLGTSFLVAGFVSLFRIRNVIKQQGRGTTDKLEKLMIRIGV FSVLYTVPATIVIGCYFYEQHLKEKWELSRNCNCLENVYKPNYAVFMLKYFMCLVVGITSGFWIWTGKTLQSWRKLFNCC RNTNDSFTSKHTKSTNYSYPGVKAVPLSQV |
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| Protein ID | pfu_aug1.0_16140.1_03676.t2 |
| Definition | - |
>pfu_aug1.0_16140.1_03676.t2 MAILHSSPGCVLLVLGVLTLACLNCWLEVNGEDDRRCQDITIPMCKGIGYNLTYMPNQFNHETQEEAGLEVHQFWPLVEI QCSPDLKLFLCSMYTPICMPTYKKPLPACRSVCERAKEGCAPLMAQYGFQWPERMKCENLPEYGTEVCMDPNNTEKSTPS STKGDGHTHKPHGHNKPDTKPKNPVKSKNPLKPHIPDITGYTVRPNGGIFDFHDVASKACQCSCKMVTLPKTSAYYNKIT TGGISNCALNCTSPYFNDDEMTFATFWVGLWSILCCIATAMTVLTFFVDMQRFKYPERPIVFLSGCYFMVSIGYIIRLIV GHQAVACDGNSIRYETTGPALCTVVFLLIYFFGMASSIWWVILSFTWFLSAGLKWGQEAIASYSQYFHLAAWLVPSVKSI AVLAMSSVDGDAISGICYVGNQNLNNLRGFVIAPLFVYLLLGTSFLVAGFVSLFRIRNVIKQQGRGTTDKLEKLMIRIGV FSVLYTVPATIVIGCYFYEQHLKEKWELSRNCNCLENVYKPNYAVFMLKYFMCLVVGITSGFWIWTGKTLQSWRKLFNCC RNTNDSFTSKHTKSTNYSYPGVKAVPLSQV |
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