Gene
| Gene Model ID | pfu_aug1.0_16170.1_10900 |
|---|---|
| Locus | scaffold16170.1 : 2016 ... 12341 : + |
| To GenomeBrowser | scaffold16170.1:2016..12341 |
| Genes list of scaffold | scaffold16170.1 |
| Synonym | pfu_aug2.0_27.1_23272 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16170.1_10900.t1 | 2 | 1 | Geminin | 9 | 89 | 2.3e-18 | 66.6 | 3.1e-22 | 2.3e-18 | 66.6 |
| pfu_aug1.0_16170.1_10900.t1 | 2 | 2 | Geminin | 133 | 175 | 2.3e-18 | 66.6 | 0.22 | 1700.0 | -1.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16170.1_10900.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16170.1_10900.t1 atgaagagattatctgaggcaggggaagacatcgatccagaagtatttgaacttatggttcaagaggaggtacctgaaag ttactggaaggaagtagctgagcagaggcgggtggccctgaatgattccttacatgagaatgaaatgctccacaaggaga tagaggatctgaaggatgagaatagtaagctgacagtgatggccagtaaggcagattactttgctgatgttatacaggga atgcttgatgatcagtcagaagaagataaacctgtcacagatacagaggacagtaaagatgttgagtcggaaaaatgtga caaaacagatgttgaacctcagctcgtagataattgtgaaaattgtcaaaatgcttgtgaaaacgatttagaagtagttg atgtgaaaaaggaatccagtcaccttgcagaagaacttagcaaagactctgcatcaattcaagatgataatgaagaagtg acaagctcagagacaaaaaataaacttgatagtctagagtcaagtgaggagaaaagccccagaagaacttatgaagaatg tgacacggagagcagtaaggaagtaattgagaaagctgtcagtgagcaatgtcatacagtagaggagagagaaaattcaa aggaaaaagagttaccgaagattaacgatggctgcaaactcgtacctttggttatcaacgttgatcaatg |
|
Protein
| Protein ID | pfu_aug1.0_16170.1_10900.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16170.1_10900.t1 MKRLSEAGEDIDPEVFELMVQEEVPESYWKEVAEQRRVALNDSLHENEMLHKEIEDLKDENSKLTVMASKADYFADVIQG MLDDQSEEDKPVTDTEDSKDVESEKCDKTDVEPQLVDNCENCQNACENDLEVVDVKKESSHLAEELSKDSASIQDDNEEV TSSETKNKLDSLESSEEKSPRRTYEECDTESSKEVIEKAVSEQCHTVEERENSKEKELPKINDGCKLVPLVINVDQ |
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