Gene
| Gene Model ID | pfu_aug1.0_1618.1_58606 |
|---|---|
| Locus | scaffold1618.1 : 77206 ... 98759 : + |
| To GenomeBrowser | scaffold1618.1:77206..98759 |
| Genes list of scaffold | scaffold1618.1 |
| Synonym | pfu_aug2.0_2648.1_28896 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1618.1_58606.t1 | 2 | 1 | Miro | 19 | 114 | 1.3e-16 | 61.1 | 3.4e-14 | 6.3e-11 | 42.8 |
| pfu_aug1.0_1618.1_58606.t1 | 2 | 1 | Ras | 27 | 157 | 9.09443e-43 | 145.4 | 2.1e-33 | 3.8e-30 | 104.4 |
| pfu_aug1.0_1618.1_58606.t1 | 2 | 1 | Arf | 45 | 127 | 1.5e-07 | 30.7 | 3.2e-06 | 0.0059 | 15.8 |
| pfu_aug1.0_1618.1_58606.t1 | 2 | 2 | Arf | 153 | 199 | 1.5e-07 | 30.7 | 3.0e-05 | 0.055 | 12.7 |
| pfu_aug1.0_1618.1_58606.t1 | 2 | 2 | Ras | 165 | 210 | 9.09443e-43 | 145.4 | 3.1e-13 | 5.8e-10 | 38.7 |
| pfu_aug1.0_1618.1_58606.t1 | 2 | 2 | Miro | 165 | 204 | 1.3e-16 | 61.1 | 1.2e-05 | 0.021 | 15.2 |
| pfu_aug1.0_1618.1_58606.t1 | 1 | 1 | zf-Sec23_Sec24 | 375 | 410 | 6.7e-07 | 28.7 | 8.8e-10 | 1.6e-06 | 27.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1618.1_58606.t1 | gi|340373130|ref|XP_003385095.1| | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1618.1_58606.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1618.1_58606.t1 atggagtttggtagtaaatttgcctacatgccatccaagatggaggaagacgagattccagacgatgatgacattgttga cacagttctggaggccagtgctacagataaggatataggtgatgacgagtccgtttgtcttgacatcttggatactgccg gccaggaggaatattcgtcaatacgtgacctgtacatgagaactggtgatgctttccttattgtgtacagtgtgaccgac cccatgtccttcgatcaagtggaaccattgtatgaacttatcaagacatttgaatacagaaataaattacttcctgcggt tatatgtgctaacaagcaggatctcacaccgactgtacctaattctgaaggacaaagccttgcagacaagcttggtatac cattccttcccacctcagctaagaccggcctgaatgtccaagaggcttatgaaactgtagttagacaaattcctacactc aatgctcaatgtaaggtagtgatgcttggaagtgggggagcaggaaagtcatctataactacacgatttgtctcggggtc atttgtagaaaactatgatccaactatagaggactcctacagaaaaatgatcagggtcaagggacgcaagcctagaggac acagttctgatcggattttgactattcttcatacacttaatccttttgacaagacgaagaaccctattgattttcaaggt caaggtcacagattggaaatctctggtgtacagcctatcggactcagtttaggttggatcattaccaaacttcatacact tattccttttggcaagaggaagaatccaattgattttcaagataacaatgtgcagaaaagtgccggcagcacaaggagaa aatcaggagatatgacaacattacagagagttggtagctttttgtcctcgctgggctccggtattttccgcagatcctca cagtgtcagagggaaaggccagtaacggctccagcccagcctactaaggcaaagtccaggaaaagcgccatgtctaaaat gacaaaatgtgaaagagcagacgccaatgttgtcatggttacactgaatacactagaggacatgtctaccttagcaacag gagatcctgtctactgcaaaaaatgtcaggccataatgtcatgtctatctgaagtagtagaggaggagggagacttaaaa tggatctgtgaattctgtggagcagaaaatattgctaaagacatgaagaaagaagaggtaccgagtggggaaatgacaga ttttgccatgagtccaccatcagaggcagcagaaggggattcaacagaaaaagaaaacgaagctgatgaaaagaagaaag cggggccttcaaaaggatatttagtgtactgcttagacatcagtggttctatgagctgtagtaataaattaccagaatta caatctgtgcaaggagctcctgtaaatctgaggattgtaaaagaatgtgcggagatctctggtggtaccattaacgtact gaaccctctagagataatgagacagctccgtttaatatcgcagaactacatcgtggcgaccactgtgtgtgtaacattac tgctacatcctgatttagaagtagacgatcctcagtatccaaagggcaatagtcggattgtgaaagaagttggcacagcc acaagagacatgaccttgacctttaaatttcggcttaaggatccaaagaaagcaccttctctaaagaaacttccattcca gaagcagcagctgggaagaacagaactttcagacgagcaatcagcaatacttaccaagaatgctttcagtaacccatcca gtcgatacatggggtcctccaaaaaatcacaaatcctcagtaaacgagttgagaaaaatagcatgttgagtgagcagtat taccagtaccagtgttga |
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Protein
| Protein ID | pfu_aug1.0_1618.1_58606.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1618.1_58606.t1 MEFGSKFAYMPSKMEEDEIPDDDDIVDTVLEASATDKDIGDDESVCLDILDTAGQEEYSSIRDLYMRTGDAFLIVYSVTD PMSFDQVEPLYELIKTFEYRNKLLPAVICANKQDLTPTVPNSEGQSLADKLGIPFLPTSAKTGLNVQEAYETVVRQIPTL NAQCKVVMLGSGGAGKSSITTRFVSGSFVENYDPTIEDSYRKMIRVKGRKPRGHSSDRILTILHTLNPFDKTKNPIDFQG QGHRLEISGVQPIGLSLGWIITKLHTLIPFGKRKNPIDFQDNNVQKSAGSTRRKSGDMTTLQRVGSFLSSLGSGIFRRSS QCQRERPVTAPAQPTKAKSRKSAMSKMTKCERADANVVMVTLNTLEDMSTLATGDPVYCKKCQAIMSCLSEVVEEEGDLK WICEFCGAENIAKDMKKEEVPSGEMTDFAMSPPSEAAEGDSTEKENEADEKKKAGPSKGYLVYCLDISGSMSCSNKLPEL QSVQGAPVNLRIVKECAEISGGTINVLNPLEIMRQLRLISQNYIVATTVCVTLLLHPDLEVDDPQYPKGNSRIVKEVGTA TRDMTLTFKFRLKDPKKAPSLKKLPFQKQQLGRTELSDEQSAILTKNAFSNPSSRYMGSSKKSQILSKRVEKNSMLSEQY YQYQC |
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