Gene
| Gene Model ID | pfu_aug1.0_16202.1_25501 |
|---|---|
| Locus | scaffold16202.1 : 5726 ... 10141 : + |
| To GenomeBrowser | scaffold16202.1:5726..10141 |
| Genes list of scaffold | scaffold16202.1 |
| Synonym | pfu_aug2.0_108.1_26859 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16202.1_25501.t1 | 1 | 1 | Arf | 19 | 140 | 7.5e-26 | 90.4 | 1.4e-29 | 1.0e-25 | 89.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16202.1_25501.t1 | gi|348528991|ref|XP_003451998.1| | PREDICTED: GTP-binding protein SAR1b-like [Oreochromis niloticus] | 9.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_16202.1_25501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16202.1_25501.t1 atgagtttactcgctgatggcaaacttgttcaacaccctcccacacccagaccagcaagacggttgtggaaggactattt tccagcgataaatggcgtagtttttgttgttgacgccgccgatgctgaaagattagctgaagcgaaagtagagttaacag cagtgttagaggacgatttgatatcagacattccagttcttatactaggaaacaaaacagacaaaagggaaagtatagga atggaaaaccttatacagcaactggatattcagcgacatctcacaaaaatgaatgatggactatatagttataacaaaga agacaaataccacagaaagggcgaatgtaaactttttatgtgtagtatgctgaaaagggaggggtatggagatgccttca ggtggttagccaatcaaattccataa |
|
Protein
| Protein ID | pfu_aug1.0_16202.1_25501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16202.1_25501.t1 MSLLADGKLVQHPPTPRPARRLWKDYFPAINGVVFVVDAADAERLAEAKVELTAVLEDDLISDIPVLILGNKTDKRESIG MENLIQQLDIQRHLTKMNDGLYSYNKEDKYHRKGECKLFMCSMLKREGYGDAFRWLANQIP |
|