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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_16226.1_03688
Locus scaffold16226.1 : 34896 ... 38445 : -
To GenomeBrowser scaffold16226.1:34896..38445
Genes list of scaffold scaffold16226.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_16226.1_03688.t1 gi|327261303|ref|XP_003215470.1| PREDICTED: nucleolar protein 10 [Anolis carolinensis] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_16226.1_03688.t1
Definition-
>pfu_aug1.0_16226.1_03688.t1
atgcagaagcaagatgtagatttacgtcgcaggatcgagctgatacaagattttcagatgccgacagtcagccatcgtgt
tcagatttctccagatggccaatacatatgtgctgccggaacgtataagccgagattccgctgttatgatgtttctaact
tgtcactcaagtttgagagaggattggattctgatgtcgtcaaattttgtttccttggcgatgactacgacaagatcgta
tttttacagtgtgatagatatttagaatttcacacacagtttggtcgttattatcgaacaaggattcccaaatatggtag
agacatggcgtatcattttccaagttgtgatttgtttattggaggtgttggtatggaaatttacagactgaacttagagc
aggggcgatttctgagtccgtttgtctctaaagctgaagaaattaactgttgtgaaattaattcttctcatggggttttg
gcttgcggaacatcatcaggaactgttgaatgttatgatccacgaacaagaactagagcaggcatgctagacgtagccct
agctagtcatgtggaagattttagcattaccgggatgccaaaagtgacggcactgaaattccgtgacgcgttgaatgttg
gaataggtacgaacacaggtcatatcttactatatgatttacgttcagataaaccacttcttgtgaaagatcataattat
gagctgcccatcaaggctatacagtttcagaaatctctcgacttagtgctttctatggactcgntgaatccagtggtgtc
aaaactggataaaatgaggaggaaaaaagcgatgcgagagcagtttgaggaagttgaggataatgaggaggaagtggagg
acaaaggtgaaagtgaaagtagctctgatgacgagcacgcgtggaccaaggagctaaaggatcagcatcggaagctgaag
aaggaggataaacaaaggaaggcagaactaaaagccggcatgaagttctttgaattaaaagaaggacaagaattcaaaaa
tctcaaggacaagtccaaaaagaaggagacgaagaaatcatttgcggagagacttgccagtgagtctgagggtaagggag
atgtgattagggaggggggagcaataggtaacaaggaaatgaccttcaaatttaaaaagagtgaaaaagaaatcaaacgg
aagatggattctaaacagcacagagaggagaggaaaaggttacgcaggccggctgggcatctcggcaagaaacctagggc
ttggatggataattag

Protein
Protein IDpfu_aug1.0_16226.1_03688.t1
Definition-
>pfu_aug1.0_16226.1_03688.t1
MQKQDVDLRRRIELIQDFQMPTVSHRVQISPDGQYICAAGTYKPRFRCYDVSNLSLKFERGLDSDVVKFCFLGDDYDKIV
FLQCDRYLEFHTQFGRYYRTRIPKYGRDMAYHFPSCDLFIGGVGMEIYRLNLEQGRFLSPFVSKAEEINCCEINSSHGVL
ACGTSSGTVECYDPRTRTRAGMLDVALASHVEDFSITGMPKVTALKFRDALNVGIGTNTGHILLYDLRSDKPLLVKDHNY
ELPIKAIQFQKSLDLVLSMDSXNPVVSKLDKMRRKKAMREQFEEVEDNEEEVEDKGESESSSDDEHAWTKELKDQHRKLK
KEDKQRKAELKAGMKFFELKEGQEFKNLKDKSKKKETKKSFAERLASESEGKGDVIREGGAIGNKEMTFKFKKSEKEIKR
KMDSKQHREERKRLRRPAGHLGKKPRAWMDN

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