Gene
| Gene Model ID | pfu_aug1.0_1623.1_44077 |
|---|---|
| Locus | scaffold1623.1 : 34106 ... 62186 : + |
| To GenomeBrowser | scaffold1623.1:34106..62186 |
| Genes list of scaffold | scaffold1623.1 |
| Synonym | pfu_aug2.0_236.1_20467 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1623.1_44077.t1 | 1 | 1 | DUF410 | 41 | 284 | 0.0 | 247.9 | 0.0 | 0.0 | 247.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1623.1_44077.t1 | gi|291231439|ref|XP_002735673.1| | PREDICTED: Golgi to ER traffic protein 4 homolog [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1623.1_44077.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1623.1_44077.t1 atgtcgggccgaagtggtggtgtggatcgagttttagcaaaatgtcaagcttgtgtagatgctggaaactattatgaagc acatcagatgtatagaacgttatattttaggtacaaaggccagaagaagtatccagaagctatcaatctgttatacaatg gtgcccttttactccttaatcataatcaacatcagagtggcacagatctagctttactgctggtagacctcctgaaccag tcgatgactcaagttacagaggaattagttgaaaagatcggaacactattccgaagtatggattgtacaaatcctgacag acataattttatggtatcagcagtgaggtggtcaatgaaggttgacaaccagcatactcgagggcatccagagcttcaca aggctttcggcactttcttttggcgagagaagaattacattcaggccaggtaccatttcctgcattccacagacggaagg agttgtgcgaccatgctgatagaataccatacaaactttgggtatccctcggaagttgatctatttatagctcaggctgt tttgcaatatttatgtttacaaaacaaagagacggcaagggtggtatttgtcacttataccaaggaacatcctgatgtca cggacgggcctccatacgtcactcctctcctaaactttatatggttcttactcttagcattggaaggtgggagagtcact gttttttcaatactttgtgaaaaataccagacgtcaattagcagagatcctagttataaagagtaccttgacaagatagg gcagctgttctttggtcttcctcctccaaagaaacaaaaccagggactgtttggagtcaatgtctccaaaaagaccatga ttcagaaaccacatgaaagacggcacataaaaggagaaagaccaatgtgtacccggaaacgtttttggacgtccatctgc cgtttacatagaaaatggtattgttatccggattacgtgcacacaacctaccgtcctctaccatggtacatgtactttga cattattattaccttgtacttcgacaataacgtacataaccttgtgccacttgtatacatcgacgattag |
|
Protein
| Protein ID | pfu_aug1.0_1623.1_44077.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1623.1_44077.t1 MSGRSGGVDRVLAKCQACVDAGNYYEAHQMYRTLYFRYKGQKKYPEAINLLYNGALLLLNHNQHQSGTDLALLLVDLLNQ SMTQVTEELVEKIGTLFRSMDCTNPDRHNFMVSAVRWSMKVDNQHTRGHPELHKAFGTFFWREKNYIQARYHFLHSTDGR SCATMLIEYHTNFGYPSEVDLFIAQAVLQYLCLQNKETARVVFVTYTKEHPDVTDGPPYVTPLLNFIWFLLLALEGGRVT VFSILCEKYQTSISRDPSYKEYLDKIGQLFFGLPPPKKQNQGLFGVNVSKKTMIQKPHERRHIKGERPMCTRKRFWTSIC RLHRKWYCYPDYVHTTYRPLPWYMYFDIIITLYFDNNVHNLVPLVYIDD |
|