Gene
| Gene Model ID | pfu_aug1.0_1623.1_44078 |
|---|---|
| Locus | scaffold1623.1 : 65276 ... 91771 : + |
| To GenomeBrowser | scaffold1623.1:65276..91771 |
| Genes list of scaffold | scaffold1623.1 |
| Synonym | pfu_aug2.0_236.1_20468 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1623.1_44078.t1 | 1 | 1 | Homeobox | 123 | 179 | 2.6e-23 | 81.3 | 1.1e-26 | 7.9e-23 | 79.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1623.1_44078.t1 | gi|348509388|ref|XP_003442231.1| | PREDICTED: homeobox protein unc-4 homolog [Oreochromis niloticus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1623.1_44078.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1623.1_44078.t1 atgttaacgtatagcgaacggcaagttaatgaacgtagaaatatgagtaccggtacccttggtttgttggacgctcgtta tcaacatggatacggaatgttatcttcccttgctgggtatgcagcccattttgggggtccctttgccgctctaggttttg cctccaccgtggggaacccatataatattgactatagtgcacaccatgggggtcacggggcctttacaatggatggactc ctcccaaacgcatcctctcgaggtctttcagcatcccaagttttgtcaagtccaactggaaaggagagaaatattcattc tccagacaaaagtgacgatgaccgagagagtgcagcagcaaagcgacgccgaaccaggaccaattttacaggatggcagc tcgaggagcttgagagggccttccaagacagccactatccagacgtattcatgagggaggcgctggcactgcgactcgac cttgtagaatccagagtacaggtctggtttcaaaacaggagggcaaagtggcgaaagaaggaaaacacgaaaaaaggccc cggtcgtccggctcataatgcccatccgcaaacatgcagcggtgaaccgatggatccagaagaaatcaaaaagcgcgaaa tacagaggcaagaaaagaagagaaggaagcaggaagaaaggctgaagaaattagaagaaagaaggaaaaatctgcaagag caaaaacatcaagactttagaatatccgaatgttcgtcgtcgtctagagtgctatctgatgatgatagagagtcccatta tagtgacgcggcagactctgacacgagttctcataatgtaagcagtggtaataatgacagctttaatatagaggagggca acagaaggtgctcattcagtatagacagtttattagaagcatcaaaagtcccgcgcggaaggagaccgaattccaaatat cctcgtgtgcaagctagtaaatcagttagtgctcttggactgggtatgatgcccctctttcccatcacacaacctgtagg cttcatcgtggaacaaagatcgcggtccccattgtcagacgataacatttctgtaacgtcagaggaaattcacgacaaaa ccggaagtgacatagaggaagacaccaatattgacgttgaatcgagtgacagtgaagatgatgaaaaatcccacaaaagc cacagtcccacagaaatcgaacagaatcaatacaaaaactga |
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Protein
| Protein ID | pfu_aug1.0_1623.1_44078.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1623.1_44078.t1 MLTYSERQVNERRNMSTGTLGLLDARYQHGYGMLSSLAGYAAHFGGPFAALGFASTVGNPYNIDYSAHHGGHGAFTMDGL LPNASSRGLSASQVLSSPTGKERNIHSPDKSDDDRESAAAKRRRTRTNFTGWQLEELERAFQDSHYPDVFMREALALRLD LVESRVQVWFQNRRAKWRKKENTKKGPGRPAHNAHPQTCSGEPMDPEEIKKREIQRQEKKRRKQEERLKKLEERRKNLQE QKHQDFRISECSSSSRVLSDDDRESHYSDAADSDTSSHNVSSGNNDSFNIEEGNRRCSFSIDSLLEASKVPRGRRPNSKY PRVQASKSVSALGLGMMPLFPITQPVGFIVEQRSRSPLSDDNISVTSEEIHDKTGSDIEEDTNIDVESSDSEDDEKSHKS HSPTEIEQNQYKN |
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