Gene
| Gene Model ID | pfu_aug1.0_16290.1_03693 |
|---|---|
| Locus | scaffold16290.1 : 8456 ... 16260 : + |
| To GenomeBrowser | scaffold16290.1:8456..16260 |
| Genes list of scaffold | scaffold16290.1 |
| Synonym | pfu_aug2.0_5191.1_06090 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16290.1_03693.t1 | 3 | 1 | RVT_1 | 182 | 344 | 2.2e-27 | 95.8 | 4.3e-30 | 1.6e-26 | 93.0 |
| pfu_aug1.0_16290.1_03693.t1 | 3 | 2 | RVT_1 | 344 | 377 | 2.2e-27 | 95.8 | 0.29 | 1100.0 | -1.2 |
| pfu_aug1.0_16290.1_03693.t1 | 1 | 1 | zf-H2C2 | 712 | 746 | 4.4e-08 | 32.3 | 3.3e-11 | 1.2e-07 | 30.9 |
| pfu_aug1.0_16290.1_03693.t1 | 1 | 1 | rve | 767 | 878 | 1.8e-24 | 86.1 | 1.3e-27 | 4.7e-24 | 84.7 |
| pfu_aug1.0_16290.1_03693.t1 | 3 | 3 | RVT_1 | 1345 | 1377 | 2.2e-27 | 95.8 | 0.73 | 2700.0 | -2.6 |
| pfu_aug1.0_16290.1_03693.t1 | 1 | 1 | DUF3609 | 1433 | 1615 | 2.5e-06 | 26.4 | 1.2e-09 | 4.6e-06 | 25.5 |
Transcript
| Transcript ID | pfu_aug1.0_16290.1_03693.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16290.1_03693.t1 atgaacaatatcatccgcaaccgcaacaccaacagccggcgattcccatggataccgcgtaccgaagcaatggacctgcg cagtatggacaaatgcacccccaaccaccacaccagcaacaccagacgcgacaagtcgcccaaggacaaagggacccgtg ctatagatgcggcgattctccgtcatcttcccaaaattcgaactctcaatctcaaaactctcattctcaccacgtcagga catcactaccctctcttncattttgatttttcaaagtctgatattgacgaacagcgaaagaagaaatttttgaacttttt aaatgcacataggcatacctttgcatcaaatttaaatgaacttggaaagacaagactgacgaaacatcatattgagactg tacctggcacccgtccaataagacgaagagcttatcatgctaaaccggaaatgagacgagaaattgacagacaggttcag gaaatgatagaaaatgatattgtggaaccatcaaactccgcctggcattcccctgtgcttcttgttaaaaagccctcagg cgagtttcggtttgtggtggattacagggatctaaacaagcacaccattccacaatcatttcctttgccccatcttagta gtgtctttgactcggtgggtgaatcaaaagcccaatggttctcttcccttgaccttcgaagtgggttttggcaaattggc atggacgaccagtcaaaacataaagctgcttttattacccaatcaggtgtctatgagtggaagagaatgccatttggctt gatgaatgctcccatcacctttcagacacttatgaccaatgtcttgagagacatcaactggcgatttgttttgtgctata tagacgatctcctcatttttagtaagacatttgaggagcacttgcaacatttgcatgaaattttcaaaaggcttgatgag gcaaacttgaaattgcacccttccaaatgtcattttgccctcaagcaagtcaaatttcttggacacattattacccgtca tggtgtagaggtcgacccagataaaacccgacttgtcaaagattttcctagaccaaaaagcaagactgaagttcgcaggt ttcttggttttgcaaactattaccgcaaatttattgaaaattttgcgagaatagcctctcctcttcatgccttgactgca aagtctggtaagtttcagtggtctcatgaatgccaggaagcgtttgaatctatcaaacaacgtcttctctcttctcctgt acttgcctatcctgactctgacaaacctttcattctaacttgtgatgcatctgatcactctatcagttacattcttggtc agaagacaggaaataaagaacaagtaattgcttatggaggtaaaacattgtcacccgctgagcaaaagtacatcataaca gagaaagaattgcttgcagtcgtgcgaggtgtagaggcatataggccctatctctgtggttcaaagtttacaatctacac tgaccacaaagctcttgtctggttgaagtcggccaaacatactggtagactcgaacgatgggcattgaaactccaagagt accaatttgacatctgtcacaaaccaggtaagtcaaacaatgcagccgacgccttgagtagaattcctattgaacaggcc actcataaagaggtaagtacacaaacagaaactctctctgacattaattctattcaggttaccgagtcagaggaggaaca aaaagccattgcagtggagttgttctatgagcatgagccaaatccaatcatagcgcaaatagattcaggtaattttcagg ctaccatagagaataataccaaactgggcgaaatgcagtcaaaggatccagatttcagaaaactctatgagtacattctc agaggcaaaacacctgccataaaaaaggtaagagacaaagtaatttcagaggcccaacattatgagataacagatggtgt gttataccacaaatatcagaggcgatgcagaaaggtacccacagatttaaaattcatcatgagaatagcccttccgcaac caatgaggaaacaggtccttgaggcttaccatgacagcttagctggaggcggccatcttggcattgataaggtaagaact tctctaaatgaaaagtaccattggccaaggatggaccaggacatcgtagagtatgtacgatcttgtgacaggtgtcaaag agccaaaagagacttcaatccgtctaatccaccactcgcatcccttcccaaaggaggaaaatttgagcgctggcaggttg acattctaggtcctcttcataaaacccctgaaggatatcagtacattttactgtgtatagattccttttctcgttggcct gaggcatttcctttgaagacgcaagactccaaggaaattgcaaatgttctctttgaacacatctttgctcgctatggctc tcctagggttttactgtcagacagaggaagaaatttcatgtctaatctgatcaatgctctgtgtgaagtattgcacatta ctcgctatcacacttcttcctatcaccctaacactaatgggttggtcgagcgacaaaacagtaccatagctcaaagtttg cgtgcttactgtggtggcaatcaggaaaattggccaaaatatgtaccaggcatcatgatggcttttagaaaatcttctaa ttctgcttccactgaatttcctccctttgagttgttatttggccaagcaatgaggcttcctatagaccttcagcttgaac caagggagaatatagggttaacaaccacgcagtatatgcaggaaatactggaacaaattaaagtctatgacgacgtagcc atggcaaatgaccaggctaatcaaactgcaaacaaagagtatcatgatcgcagggctaaaacaccccagtttcgcctagg taaccttgttcttatgaagcaacataaagtaaaaccaggcacgtcaaagaaactaacggataaatgggaaggaccctata gaatcatagatctaggacccaactatacgtacaaattaaagcgggtaagtaacaacaaggtccataaatccttgatcaac gccgtcaacctgaaattgtaccatccaccaggaaccgtaagggatagattgtctccagcgccccaaacttctgaccaacc caaccgcagtgatgagaatcaacttcctcctgcttcagacaattccacctcgggtgatgtaagtggttcgcagagtcagc agcgcactgtctccagtgaatcacagggtcaaagaaggtcaacagaaagcgctagttcccaaaatcaacagggtcagcaa aacatcccgtcacaaggtccctcaacccacacacagtcccagaatcgttccatacgacatggattcaaaaaggttataac gggacgattcaagcatggatctagacagcttcgcgtgctctgggacacaggcgaaaagacttgggagccagattcatcct tcgatgacaaacttctcgaggagcttaatcgagaatggacctcaagaggaacacgaaagaaacggaacttcctgatctat cttggtggaatcataagaattttcattgtcttcgggttggttgccacagtcgcaggatcggccaaggaacatgaatccac cgggagtgccgtgatccaaagaattaactatggggttattttcaaggaggagtcgaaactcattttatcacaagaatact ggcggcatacatttcacgtaattttgccgaaaaagatgataccctcatatgtcgacaagtgtatgcaaaacacatcatat tgccataccataaacaatcttagaacattcgtacatactcttcaagtagaaacagcattccatgttgtggaaacattaaa atcgatgaaatctctggttcctcatatggacatttcggatggaaaacgcgctactagatctcttcttccttttattggct ctttatctacatctttattcggaacagctaccattgacgacgtcaacctccttgctcagcacatgaaccagattataaaa aggagtaacagtatagctgcaacactaaaacaacatggaaaacacttatcttccttcatgtcggtcatggacaagaaaac ggaaaatttacttgaaggaataaaactgaattcagcaaaaattgattccgtcataaactcattttctgcaaaatttgctg aagttaagtacactatttcaaacatgtctgttattctgttggaacaagttatgcaagctacacaaataagatcagatctt gacaaacttatgtctgtggtacaaagtttagtggaaggaaaaatttcaccctttttgatttccaaaggcagacttagaaa agttattacacagatttcagatattttgcggaaatcaaataagggattctatcttactcatactgatccttcttactatt actctaatgctcagttcgcttatgctcgttcctatggacatctttttattagtataaagttcccagtctcatctagtaaa gttcctttaactctttacaaaatcatttctctgccagttccaattaacaaaacttctccgcatgctactcaactcttaaa ccttccatcttacatcgcttatactcatcatcgtgaccattatattcacattgaaaattctgacttggttaactgtaagc atggaccaacagcactttgtaactttaataagcctcttactccaataaccgtacctgattgcgcatcttcattattttct aataatcggaaacggattcattcacagtgtgattttcgttttgtcccacacctactaaaacctaacattatagaactatc tccaacttccgttttactttataacatagagaacattgcgttggactgtcctaaggaaaagaaagttgtacaagggtgtt cattttgcatctttacagtcccgtgcaaatgttctatatcaactaacaatctttacttctctcccagattagttgactgt tataacgccacaattaacgaaactactgtccatccttttaacctagcactacttcagcacttctttcacgatattgacct ttaa |
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Protein
| Protein ID | pfu_aug1.0_16290.1_03693.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16290.1_03693.t1 MNNIIRNRNTNSRRFPWIPRTEAMDLRSMDKCTPNHHTSNTRRDKSPKDKGTRAIDAAILRHLPKIRTLNLKTLILTTSG HHYPLXHFDFSKSDIDEQRKKKFLNFLNAHRHTFASNLNELGKTRLTKHHIETVPGTRPIRRRAYHAKPEMRREIDRQVQ EMIENDIVEPSNSAWHSPVLLVKKPSGEFRFVVDYRDLNKHTIPQSFPLPHLSSVFDSVGESKAQWFSSLDLRSGFWQIG MDDQSKHKAAFITQSGVYEWKRMPFGLMNAPITFQTLMTNVLRDINWRFVLCYIDDLLIFSKTFEEHLQHLHEIFKRLDE ANLKLHPSKCHFALKQVKFLGHIITRHGVEVDPDKTRLVKDFPRPKSKTEVRRFLGFANYYRKFIENFARIASPLHALTA KSGKFQWSHECQEAFESIKQRLLSSPVLAYPDSDKPFILTCDASDHSISYILGQKTGNKEQVIAYGGKTLSPAEQKYIIT EKELLAVVRGVEAYRPYLCGSKFTIYTDHKALVWLKSAKHTGRLERWALKLQEYQFDICHKPGKSNNAADALSRIPIEQA THKEVSTQTETLSDINSIQVTESEEEQKAIAVELFYEHEPNPIIAQIDSGNFQATIENNTKLGEMQSKDPDFRKLYEYIL RGKTPAIKKVRDKVISEAQHYEITDGVLYHKYQRRCRKVPTDLKFIMRIALPQPMRKQVLEAYHDSLAGGGHLGIDKVRT SLNEKYHWPRMDQDIVEYVRSCDRCQRAKRDFNPSNPPLASLPKGGKFERWQVDILGPLHKTPEGYQYILLCIDSFSRWP EAFPLKTQDSKEIANVLFEHIFARYGSPRVLLSDRGRNFMSNLINALCEVLHITRYHTSSYHPNTNGLVERQNSTIAQSL RAYCGGNQENWPKYVPGIMMAFRKSSNSASTEFPPFELLFGQAMRLPIDLQLEPRENIGLTTTQYMQEILEQIKVYDDVA MANDQANQTANKEYHDRRAKTPQFRLGNLVLMKQHKVKPGTSKKLTDKWEGPYRIIDLGPNYTYKLKRVSNNKVHKSLIN AVNLKLYHPPGTVRDRLSPAPQTSDQPNRSDENQLPPASDNSTSGDVSGSQSQQRTVSSESQGQRRSTESASSQNQQGQQ NIPSQGPSTHTQSQNRSIRHGFKKVITGRFKHGSRQLRVLWDTGEKTWEPDSSFDDKLLEELNREWTSRGTRKKRNFLIY LGGIIRIFIVFGLVATVAGSAKEHESTGSAVIQRINYGVIFKEESKLILSQEYWRHTFHVILPKKMIPSYVDKCMQNTSY CHTINNLRTFVHTLQVETAFHVVETLKSMKSLVPHMDISDGKRATRSLLPFIGSLSTSLFGTATIDDVNLLAQHMNQIIK RSNSIAATLKQHGKHLSSFMSVMDKKTENLLEGIKLNSAKIDSVINSFSAKFAEVKYTISNMSVILLEQVMQATQIRSDL DKLMSVVQSLVEGKISPFLISKGRLRKVITQISDILRKSNKGFYLTHTDPSYYYSNAQFAYARSYGHLFISIKFPVSSSK VPLTLYKIISLPVPINKTSPHATQLLNLPSYIAYTHHRDHYIHIENSDLVNCKHGPTALCNFNKPLTPITVPDCASSLFS NNRKRIHSQCDFRFVPHLLKPNIIELSPTSVLLYNIENIALDCPKEKKVVQGCSFCIFTVPCKCSISTNNLYFSPRLVDC YNATINETTVHPFNLALLQHFFHDIDL |
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