Gene
| Gene Model ID | pfu_aug1.0_16308.1_39804 |
|---|---|
| Locus | scaffold16308.1 : 1 ... 21087 : + |
| To GenomeBrowser | scaffold16308.1:1..21087 |
| Genes list of scaffold | scaffold16308.1 |
| Synonym | pfu_aug2.0_4050.1_02552 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | Pifuc-nanos-like A |
| Description | Reciprocal BLASTP best hit to NCBI Accession BAF73619 (Bombyx mori). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16308.1_39804.t1 | 2 | 1 | zf-nanos | 113 | 166 | 1.5e-25 | 88.9 | 4.0e-29 | 1.5e-25 | 88.9 |
| pfu_aug1.0_16308.1_39804.t1 | 2 | 2 | zf-nanos | 167 | 177 | 1.5e-25 | 88.9 | 0.56 | 2100.0 | -1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16308.1_39804.t1 | gi|157412324|ref|NP_001098702.1| | nanos-like protein [Bombyx mori] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_16308.1_39804.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16308.1_39804.t1 ctctctccaaacaacttgacaacctgcttgacggtcgcaacaaccttgatccactcaatgacaccttgatggacgatagc ttcagagagcacttcacctacgcggcaccccaaacgactacacactgccatgatcgtgacttaccacctacattcatcaa ccacacaaccaatattcattcacatacaacagatgctagcctatctacctatttcccgtactgtgctgacattgcgccac caaagaagtcacgtttaccgtcatctaccaatatggatgttgtcattgatgctggactacttaatccgaatcaacgactt cagtatgacgagaagttttgtgctctgtgtaagcgtaacggtgaagccagagagttctacactactcacgttctgaaaga caaccgtggtaaagttgtgtgtcctatccttcgtaaatatgtgtgtccgaaatgtggtgccaccggcgataacagccata ctatcaagcactgcccgaccaccagggaccgttctcacaacaaccaacactgctaa |
|
Protein
| Protein ID | pfu_aug1.0_16308.1_39804.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16308.1_39804.t1 LSKQLDNLLDGRNNLDPLNDTLMDDSFREHFTYAAPQTTTHCHDRDLPPTFINHTTNIHSHTTDASLSTYFPYCADIAPP KKSRLPSSTNMDVVIDAGLLNPNQRLQYDEKFCALCKRNGEAREFYTTHVLKDNRGKVVCPILRKYVCPKCGATGDNSHT IKHCPTTRDRSHNNQHC |
|