Gene
Gene Model ID | pfu_aug1.0_16308.1_39804 |
---|---|
Locus | scaffold16308.1 : 1 ... 21087 : + |
To GenomeBrowser | scaffold16308.1:1..21087 |
Genes list of scaffold | scaffold16308.1 |
Synonym | pfu_aug2.0_4050.1_02552 |
Manual annotation
Study field | Reproduction |
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Gene name | Pifuc-nanos-like A |
Description | Reciprocal BLASTP best hit to NCBI Accession BAF73619 (Bombyx mori). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_16308.1_39804.t1 | 2 | 1 | zf-nanos | 113 | 166 | 1.5e-25 | 88.9 | 4.0e-29 | 1.5e-25 | 88.9 |
pfu_aug1.0_16308.1_39804.t1 | 2 | 2 | zf-nanos | 167 | 177 | 1.5e-25 | 88.9 | 0.56 | 2100.0 | -1.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_16308.1_39804.t1 | gi|157412324|ref|NP_001098702.1| | nanos-like protein [Bombyx mori] | 1.0e-16 |
Transcript
Transcript ID | pfu_aug1.0_16308.1_39804.t1 |
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Definition | - |
>pfu_aug1.0_16308.1_39804.t1 ctctctccaaacaacttgacaacctgcttgacggtcgcaacaaccttgatccactcaatgacaccttgatggacgatagc ttcagagagcacttcacctacgcggcaccccaaacgactacacactgccatgatcgtgacttaccacctacattcatcaa ccacacaaccaatattcattcacatacaacagatgctagcctatctacctatttcccgtactgtgctgacattgcgccac caaagaagtcacgtttaccgtcatctaccaatatggatgttgtcattgatgctggactacttaatccgaatcaacgactt cagtatgacgagaagttttgtgctctgtgtaagcgtaacggtgaagccagagagttctacactactcacgttctgaaaga caaccgtggtaaagttgtgtgtcctatccttcgtaaatatgtgtgtccgaaatgtggtgccaccggcgataacagccata ctatcaagcactgcccgaccaccagggaccgttctcacaacaaccaacactgctaa |
Protein
Protein ID | pfu_aug1.0_16308.1_39804.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16308.1_39804.t1 LSKQLDNLLDGRNNLDPLNDTLMDDSFREHFTYAAPQTTTHCHDRDLPPTFINHTTNIHSHTTDASLSTYFPYCADIAPP KKSRLPSSTNMDVVIDAGLLNPNQRLQYDEKFCALCKRNGEAREFYTTHVLKDNRGKVVCPILRKYVCPKCGATGDNSHT IKHCPTTRDRSHNNQHC |