Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_16324.1_25506
Locus scaffold16324.1 : 10615 ... 17395 : -
To GenomeBrowser scaffold16324.1:10615..17395
Genes list of scaffold scaffold16324.1
Synonym pfu_aug2.0_943.1_11323

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_16324.1_25506.t1 gi|260825542|ref|XP_002607725.1| hypothetical protein BRAFLDRAFT_114714 [Branchiostoma floridae] 2.0e-13

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_16324.1_25506.t1
Definition-
>pfu_aug1.0_16324.1_25506.t1
atgagagggaaccacgaaagctatccagttgaaaaaagattagctcacacagacggggcccgtgatgtacgatggtccaa
gtctcaccccactctcatagcgaccaaaggcaggcctggtaaacagatcaaagtgttcagtgttaggaatcatcaggtgc
ccttgaacaccagccttcctatcgcctatggaatgagctggcattatgtgtatcctatactagctgttggaggagacaag
aaagtggacttgtattattgtgatcaaaccaaaagtgacatcagatag

Protein
Protein IDpfu_aug1.0_16324.1_25506.t1
Definition-
>pfu_aug1.0_16324.1_25506.t1
MRGNHESYPVEKRLAHTDGARDVRWSKSHPTLIATKGRPGKQIKVFSVRNHQVPLNTSLPIAYGMSWHYVYPILAVGGDK
KVDLYYCDQTKSDIR

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