Gene
| Gene Model ID | pfu_aug1.0_1636.1_66054 |
|---|---|
| Locus | scaffold1636.1 : 2866 ... 21620 : + |
| To GenomeBrowser | scaffold1636.1:2866..21620 |
| Genes list of scaffold | scaffold1636.1 |
| Synonym | pfu_aug2.0_734.1_14511 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1636.1_66054.t1 | 2 | 1 | DNA_mis_repair | 25 | 59 | 5.3e-07 | 29.1 | 0.2 | 2900.0 | -2.4 |
| pfu_aug1.0_1636.1_66054.t1 | 2 | 2 | DNA_mis_repair | 77 | 147 | 5.3e-07 | 29.1 | 1.0e-10 | 1.5e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1636.1_66054.t1 | gi|291231519|ref|XP_002735708.1| | PREDICTED: DNA mismatch repair protein Mlh1 [Saccoglossus kowalevskii] | 9.0e-20 |
Transcript
| Transcript ID | pfu_aug1.0_1636.1_66054.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1636.1_66054.t1 atgatcaatacggacagaaccttcattttctacattgtacgtcagacagataatacagcgaggccttttaaactttccat cctgtccgaccctctgtatgtcactctgtatgtctctcctgtccgaccctctgtacgtctctcctgtccgaccctctgta catctctcctgtccaaccctctgtatgtcactgtacgtctctcctgtccaactttctgcatgtcactccatcgactggtc gattccagtgcactgaggaaagccttggatgctgtctatcagacctacttaccaaaacatacacacccgtttatctacct caggcttggtatgtcagtgtccagtttgccacagtgtggtgtacagccaaaatgccggagcattaaactgaccagtgtgt taaatctccaaaaacagatcaaagattccatgcattcaggattacgagagatgttccaaaaccacaagtttgtaggctgt gtgaaccaagaaatggccctgatgcaacatcagaccaaactttacctggtcaatacaactaagttaaggatggtaactta tgtaccctgccactattactggatgattatgtaccaagtaaattgggactcggaaaaagaatgctttgaaacgtttgcta aagaaacgagtgatttctactctatgaaaaagagtatgttcgaagatcagcaagatacaaatgaatctcaggaggaagaa gaagaagcttcaacangaaatagatacctgatgtgtacatcgatatgtacatcaagacaatcaccaaatttaataacttt ccttgaagctgttgcgacgggtgttgcgtgcaatcaggagacgctgactctccccgggcaactggtctcacttcggaatg ttattcattacgaggttcgcaaccgttcctattga |
|
Protein
| Protein ID | pfu_aug1.0_1636.1_66054.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1636.1_66054.t1 MINTDRTFIFYIVRQTDNTARPFKLSILSDPLYVTLYVSPVRPSVRLSCPTLCTSLLSNPLYVTVRLSCPTFCMSLHRLV DSSALRKALDAVYQTYLPKHTHPFIYLRLGMSVSSLPQCGVQPKCRSIKLTSVLNLQKQIKDSMHSGLREMFQNHKFVGC VNQEMALMQHQTKLYLVNTTKLRMVTYVPCHYYWMIMYQVNWDSEKECFETFAKETSDFYSMKKSMFEDQQDTNESQEEE EEASTXNRYLMCTSICTSRQSPNLITFLEAVATGVACNQETLTLPGQLVSLRNVIHYEVRNRSY |
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