Gene
| Gene Model ID | pfu_aug1.0_16385.1_10915 |
|---|---|
| Locus | scaffold16385.1 : 14566 ... 28137 : + |
| To GenomeBrowser | scaffold16385.1:14566..28137 |
| Genes list of scaffold | scaffold16385.1 |
| Synonym | pfu_aug2.0_846.1_21204 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16385.1_10915.t1 | 1 | 1 | RhoGAP | 2 | 102 | 2.8e-25 | 88.6 | 4.6e-29 | 6.9e-25 | 87.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16385.1_10915.t1 | gi|291241883|ref|XP_002740839.1| | PREDICTED: uncharacterized protein LOC100370086 [Saccoglossus kowalevskii] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_16385.1_10915.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16385.1_10915.t1 atgaaagatgccaatgtgtttgatgtgaccagccttgtcaagcagttctttcgcaagttaccagagccattgatcaccag tatgtaccatgatgccttcatcaggtgtaaccagttaggtgatactgaccaatcaacacaagccacacttctgttatgtt tgctgctgcccagtgagcaccttagtactctacgttacttccttctattgttgtctcagataacaatccatgcagaccaa aacaagatggatgcaggaaacctagctgtggtattggctccaaacctgatgcacgtaaataataagagcgagaaaatgaa ttcctctgaaaagaagctattgcaggttcagacttcagtcgtagaacttctgatctgtaatgcagcctctgtaggtatgg tatcaaaggagctttgtgagaaagccaacctgatgacagacgtatggggcaccgaggatgagctagatgctagtggagat gccctggaggactcgcacaatgtcaaggacaagaggaagtggaggaagaggtcagggtcatttcaagaattgaagaaagc aggcacgttgaacactccaagtatagcgtttagtaacagagagaatcctgacttttctgcaacaccatgtgcaaacaaga atccacgtaaacgccttggtctgttcagtccagccaatcagaggaaaggacgcaaattatccagttcaagccttagcata aactgtgcaggaaagaaaagtggacgcagtaaaggacttttccgtagattcagtggtggaaagggggataagccgctcaa tgagtcagccaaacctcctgttcctcaacaaagcatatcagtgggtgaacgcctcggaagtcaaacagaatcatgtccgg ttctaaacgacacttctaatcacgaccaagataagtctcaaacttctcctatagcagcaattcttaatcgatctgtctct tctcctccaactgtggaccagtccatcatttctgtatctggagtggaacagtccattatgtctataaatgaggataagaa ttctttgaatgagggatttataatgccagaagacttagaggatgactctgacagtgtgcagggaatgaatgtgacggtat tttctatagaaaacagtgaagatacttctacaagtggtgacaataaagttgttgaaagctcacaatgtgtatcagacact gctctttatcttgctacaaataattccgattccagtcttggatctgtcaaatttgccagtggaagtgatatatcttctca gagtcaggacacgtcagtaatcagaaacagaaaggagattcttggtttgccgttagacatgttgaatagtgaaagtggtg gaagcatatcatcacaggagagtagtaatgaagaaatgatggatgtagaaacgagtaaagatgaagttatcaaggaaagt aatgatgttacgcaaaatgacaaagaaaatgagcaggtggaacccaagacaacagaatcagacaaggtaaatgtaaatga tgaaagcacagaatcaacagagaatcctacattcaagacatgtgacagcacagacagcttactcagtggtcaaaaatctc taacaggctctccagaagagaagagcaatacaatgcaaaggtcattatcaacagacagtggcaaaggctcgatgtttgat gaatctggtgtggttgaaaataatctgaatgcagacaatcaggaggattttacttttatggatgggaaactagcaatgga attgatagagaaagaaataaaccctgaaaagcccttgttagagactgatattgactcccaagctcgggaaatgagaaaat caatatcctcaaaggaactgccaggacaacaatcacgcaggataagtgtcagtagatctcaaagtatatgttatgcatcc atgaaaaagcaaccaaatttcacaccagatttacaaatttccatggaaacacacaaccttttgtcgagagctggatacat atcacagaaaagtatgaagaaaacttccagtgatgacatacaaataatgggaccaccagtcatacctaaaatcaaacaag cggagttccacaagcctaagagggaaagtatactggctctgaaagtcaataatgcaggaagggtgaaggccaatgtccaa caatttgaaaacatagctgatagtacgccaaaaaagaaagtagaatgtgatgtagaagagagacatagatctcctatgag attccctaattcagctttcaggaaagtaggtaatgcatcacctttaagagttacccttacaaaggcaaaaaatctctcca gaatcagtgagagctcagaatcaggaataagtaaaccatgtaaaggacaagctagacttcctatctctacccagcttctg aagccaacagagaaagtcacccaacaaaataatacagaggaaacagattccaaaaaggtcaagaggaaacccagtatata ctactccaaggatgatccaaggcctcgaagaatagcaaatacacagtcaaatgaatcaagttttcttaatgctacagcag aaggcttagagatagataatgccaatgagagtgttttcacttctatggaaaaagagaattcaacaagtacagagaagaac cttagcagtgttataaccccatgtaaatcagtagcagacacgagcattgatgatttaggaaacaaaactttgacccctaa aatgccaaaaattttacagccgttgtgcgacacagttgttttacagtcgcctgtagatgccacgccaagaagtattttac gtcgatcaaataccacaatatcaccgaagtcaccacttaaagcagtgaaaagattgaaatctcccggctcaccccagatg aaactaggtcgacggcattctatgtcaccgcgtagacataatatttcaataccaatgtctattccacaacatgttcaaga agaaatgaacggaatgtag |
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Protein
| Protein ID | pfu_aug1.0_16385.1_10915.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16385.1_10915.t1 MKDANVFDVTSLVKQFFRKLPEPLITSMYHDAFIRCNQLGDTDQSTQATLLLCLLLPSEHLSTLRYFLLLLSQITIHADQ NKMDAGNLAVVLAPNLMHVNNKSEKMNSSEKKLLQVQTSVVELLICNAASVGMVSKELCEKANLMTDVWGTEDELDASGD ALEDSHNVKDKRKWRKRSGSFQELKKAGTLNTPSIAFSNRENPDFSATPCANKNPRKRLGLFSPANQRKGRKLSSSSLSI NCAGKKSGRSKGLFRRFSGGKGDKPLNESAKPPVPQQSISVGERLGSQTESCPVLNDTSNHDQDKSQTSPIAAILNRSVS SPPTVDQSIISVSGVEQSIMSINEDKNSLNEGFIMPEDLEDDSDSVQGMNVTVFSIENSEDTSTSGDNKVVESSQCVSDT ALYLATNNSDSSLGSVKFASGSDISSQSQDTSVIRNRKEILGLPLDMLNSESGGSISSQESSNEEMMDVETSKDEVIKES NDVTQNDKENEQVEPKTTESDKVNVNDESTESTENPTFKTCDSTDSLLSGQKSLTGSPEEKSNTMQRSLSTDSGKGSMFD ESGVVENNLNADNQEDFTFMDGKLAMELIEKEINPEKPLLETDIDSQAREMRKSISSKELPGQQSRRISVSRSQSICYAS MKKQPNFTPDLQISMETHNLLSRAGYISQKSMKKTSSDDIQIMGPPVIPKIKQAEFHKPKRESILALKVNNAGRVKANVQ QFENIADSTPKKKVECDVEERHRSPMRFPNSAFRKVGNASPLRVTLTKAKNLSRISESSESGISKPCKGQARLPISTQLL KPTEKVTQQNNTEETDSKKVKRKPSIYYSKDDPRPRRIANTQSNESSFLNATAEGLEIDNANESVFTSMEKENSTSTEKN LSSVITPCKSVADTSIDDLGNKTLTPKMPKILQPLCDTVVLQSPVDATPRSILRRSNTTISPKSPLKAVKRLKSPGSPQM KLGRRHSMSPRRHNISIPMSIPQHVQEEMNGM |
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