Gene
| Gene Model ID | pfu_aug1.0_1641.1_29788 |
|---|---|
| Locus | scaffold1641.1 : 2530 ... 28357 : + |
| To GenomeBrowser | scaffold1641.1:2530..28357 |
| Genes list of scaffold | scaffold1641.1 |
| Synonym | pfu_aug2.0_422.1_07497 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1641.1_29788.t1 | 1 | 1 | PHD | 430 | 476 | 3.4e-09 | 36.2 | 7.0e-13 | 1.0e-08 | 34.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1641.1_29788.t1 | gi|326671393|ref|XP_684139.4| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| maleGonad | 3 |
Transcript
| Transcript ID | pfu_aug1.0_1641.1_29788.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1641.1_29788.t1 atggcgtccgcatcagacggactctgccacaacgacccaaactttgcagttatttgcaatttcctggatagatatggcga attgttgggttttaaagatgtttcatatgcagatcttcaaacctggatagaagacacaaaacatgtgtcgtcttttctgt ccgacattcacatacgactgatgaggaaaatggggaaaaagatcacggcagataaatgggagaagtacatcatgaagttt atccttgataactactcggaggtcgatgcatgggaaatagacagatatggctacaagctcagcaaagtgtctacaaaact tacattactcaagacattgatggagaggcagtttgatctgaataagacatttaaggagaagataaacgagaaaactccag aggaattacggtacatgccactgggtagagacaaaaatggactggcatattggtacatgctggacaaggatttaaatctg agagtttacagagaagacctagacgatgtgaatgccgagacttgggaactagtttgcagtaatcgtcaagaattagctac tctcattggtcaattagcagatccagtcgaaggaaaaacagaggataaggattcaaactcagaagcttcaggaagtgtaa agaatgaaccaggtgctgtcaaaggtgaggtgtctgaagattcacaggattctgtactgtcaaaagacgttaaaaccgag ataaaaacagaagggggttcagaaactcagaaaaatctatcagatactaaacataatgtcaaaaaggaaccagataaagt cgggaaagatgaggttgatggagttggtgataaaaaggcgggaccttcacaaagtattgttaagtgtgaagtgaaagtag aagatattatgaaagtacaagtgaaagtagaacaaaacgacaataatgaagtacaatgcaaagtgaagaaaggagattta gaaactcaggaaaaaactgactcctgtttaacaggagagaaagagagtgaggattctcaatcagttcatagaactaaagg tgaaggagcgtcatcagagctgggtgattgtgaaagtgcagctccagggaaagataacgataattcaattccaggaaaag ataatgataattcaaaagattgtcaggttgattctaaggaagaaaagaaggaagatgttcaagattcatctgaaaaggaa ttgtgcaaagactctcataaggaagagaaaaaatcttcagaaagtgttgaacaagaggaacaggaggaaattaataatga tactccatgctgcaagtgccttaagtatgacagaccagaatggctgctgttgtgtgacacatgtgatgctggttatcaca cagcgtgtctacggccgcccctgtttgtcataccagagggagattggttctgtccaccctgtgaacataaacaactagtc tcaaagctacaggacaacctcagagaacttgatgtacttctgaaaaagcatgatagacttgtgaaaaggaaagagaggct tgcatttgttggtatcagtctggacaacattcttaaagaggaacggaaggaaaatattgaacctgaggaatatgaacagg actacgaaagcaacgaatcagaaagcagtggaagtgatggaagtgaaagtagttctgatcggcggagaaggcggagaaga aaaatctatcataatcatcacagaaaacttcataaacaatcacaacccaaagaaaattttgtatatgccaaaaggacgtg tcggcagcgaggtgccattagttataaatttgaagactttgacgaaatgataaattccgccattaaggacgaggtggaag aggtcaaagttcacaaagcagaatacaaaagaacaaattatggtcgtaacagaggaaaggatatggccaacatatacgag gcggagggacgggaataccatccatctgaagaggaagaggaaacgggtaaacctcctccagtcgtcagtaggaagaaagc tcggaaattgacgctgctcgattctgacgatgaaccgcaggacgatgatagcgaggaattccagctcacagatgagacct gttctgagcctccagaggaagaagaagaagatgacgatgatgaagaaatcagcgacttcagcgaggacggggagggctgg agatcatgtcgtcggaggtcacagtacggaaggtcctcaagaaggagttcacgacggagacctggggcaggcagattcaa ggattttgttgttgatgatgagtatgatagtgatgactaccggcgatccagaaggaaagccgcaagaaaacgtgtaaact atgacgaaatcctagcggatgaagatgaaacagagttggaagaggaaacagaagaaagtatcgatagttcagatctttgt tcagacgatagtgatcacaaaaagaaacataagaaatccaagaagaagaagaaaaagaaacggaagaaggagaagaggaa gaaatctaaacgaagattgaagtctgaagatgaatctggggaaagtgagaaagacaatgaagatggaagtaaaagtgatg attcttcgaaaagtgaagttgtgaaaaaagcgcacaaaaggcgtagagaaaagaagaagaaaaaaagacgtgctagtcca agtgacagtgatagtgaatctgacattggtaagagacgttctcgaagatttgctcaaaaagtgaattataaagctttact aggatctgaatcggatgaagagaggaaagtatcttcgaagaaaaagaagaaagagacatctacggaaaatgaagaaggtg aggaaaaagcagaggacaaggaagagaaagagaagaataaagaagagaatgaggaagctgaacatattgaggataaaaag gagggagataaagaagaatcagaagagaaacaggaggaagagaacaacgttaatgatcaggtcaagacggatgtggcaga agagaacagtaaaggggatgagagcaagggcgcttcagaagaacaggcgaatcatgatgttaaagttgaacacaatgagg actcctcagagaagatggcaatggaggaagattcaactcagcagatgccagttccacagccgattgccagaccatttcct caatattcagatggacatttccctcatcagaatatgccccatccagggtatcctccgatgcagggagtgccgtacggaca tcctcactacgaacgttttcattcaccgcagcataattatccacctcattctcagcatggatttgctcctggccatcagg gcaatccacctcctccacaatatccacagaattatccacagatgccaaatccaccaccacctatgggaaatccacctaac atccgcagccctacaggagatcctaatatgcctcctaacagagaccatgtgaccagtccacctcattcctcaaagagttc tatgtctagtccaccacataacatgtcacaaggtcaaatgtcaagtcctcataatatgtcacagggtcaaatgtcagggt cacacaacatgcctcaatcacaaggacaaatgatgccacagtcgggtcagggcatgatccggccccctcttatgcagcct catcatatgatgggaggccaaaatccgcccatgggaaactatcctgctaatttccaagggtacccaccacagatgcaaag gccacctaacaaccagcaaggcccaggaccaaatatgggacccatgaggccagggcatcagggcatgatgcaacaagttg gaccaggtcaaggcatgatgggccgtcctggaatgccaggccctttgccctaccagcatggacctggtatgaggccccag ggccctcatgatcagatgatgaggccaccaggcaatatgggaatgcatatgagaatgggatatccagggcaagaacagat gatgcacagaggtcctatgaatcagcatcctcagatgggaagtcagccgtcgtcctcaattcctcatagtcagggtcagt acagtggacctttaacatctttaggacagatggttccccctggagctcagggtccccctggggccccaggccaaaacatg tcagccgtgaccaatgttaccacttcatcacctagcatgtcagctggagagcatagagaaatgatgggctcctatccaag acccccgtttcctcattcaattcccagccagattcgacctgatgcagccttcatgccttctcgacctcccatgatgaatc acccaggtggtgtcatgaatccagcaatgtcaggccctcccagtttgattccagattccccagcaaatcacatgcaggga gggatggtacctcctccccagggaccaagatacgaaccatacggtatgaacggaggtccaccaccaccgtccgttacatc tccacccccttccatgcagggtggtcctatgcccccagggtcagcagccagtggtgggggtntcgatagccccaagtctg atggagggaccacagaaaagccccctgtatcgggtccacatgccccaccatcacaaccaatgcagtcaccccctccagaa atgatgggctcctatccaagacccccgtttcctcattcaattcccagccagattcgacctgatgcagcctttatgccctc tcgacctcccatgatgaatcacccaggtggtgtcatgaatccagcaatgtcaggccctcctagtttgattccagattcct cagcaaatcacatgcagggagggatggtacctcctccccagggaccaagatacgaaccatacggtatgaacggaggtcca ccaccaccgtccgttacatctccacccccttccatgcagggtggtcctatgcccccagggtcagcagccagtggtggggg tgggggaggaagaggtttcatgattgataatctattagagaagcctcaaaagtcgatctcacctgtggattatcagggcc gtaatgaagtggcgacacctagcgagcagtcagaggatagtcaggagatgagtcacctggagaggatagaatacacgtct atagcatttcaagaagaggaaggtgaaggaatgtctgacattgctgatattgtcaagtaa |
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Protein
| Protein ID | pfu_aug1.0_1641.1_29788.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1641.1_29788.t1 MASASDGLCHNDPNFAVICNFLDRYGELLGFKDVSYADLQTWIEDTKHVSSFLSDIHIRLMRKMGKKITADKWEKYIMKF ILDNYSEVDAWEIDRYGYKLSKVSTKLTLLKTLMERQFDLNKTFKEKINEKTPEELRYMPLGRDKNGLAYWYMLDKDLNL RVYREDLDDVNAETWELVCSNRQELATLIGQLADPVEGKTEDKDSNSEASGSVKNEPGAVKGEVSEDSQDSVLSKDVKTE IKTEGGSETQKNLSDTKHNVKKEPDKVGKDEVDGVGDKKAGPSQSIVKCEVKVEDIMKVQVKVEQNDNNEVQCKVKKGDL ETQEKTDSCLTGEKESEDSQSVHRTKGEGASSELGDCESAAPGKDNDNSIPGKDNDNSKDCQVDSKEEKKEDVQDSSEKE LCKDSHKEEKKSSESVEQEEQEEINNDTPCCKCLKYDRPEWLLLCDTCDAGYHTACLRPPLFVIPEGDWFCPPCEHKQLV SKLQDNLRELDVLLKKHDRLVKRKERLAFVGISLDNILKEERKENIEPEEYEQDYESNESESSGSDGSESSSDRRRRRRR KIYHNHHRKLHKQSQPKENFVYAKRTCRQRGAISYKFEDFDEMINSAIKDEVEEVKVHKAEYKRTNYGRNRGKDMANIYE AEGREYHPSEEEEETGKPPPVVSRKKARKLTLLDSDDEPQDDDSEEFQLTDETCSEPPEEEEEDDDDEEISDFSEDGEGW RSCRRRSQYGRSSRRSSRRRPGAGRFKDFVVDDEYDSDDYRRSRRKAARKRVNYDEILADEDETELEEETEESIDSSDLC SDDSDHKKKHKKSKKKKKKKRKKEKRKKSKRRLKSEDESGESEKDNEDGSKSDDSSKSEVVKKAHKRRREKKKKKRRASP SDSDSESDIGKRRSRRFAQKVNYKALLGSESDEERKVSSKKKKKETSTENEEGEEKAEDKEEKEKNKEENEEAEHIEDKK EGDKEESEEKQEEENNVNDQVKTDVAEENSKGDESKGASEEQANHDVKVEHNEDSSEKMAMEEDSTQQMPVPQPIARPFP QYSDGHFPHQNMPHPGYPPMQGVPYGHPHYERFHSPQHNYPPHSQHGFAPGHQGNPPPPQYPQNYPQMPNPPPPMGNPPN IRSPTGDPNMPPNRDHVTSPPHSSKSSMSSPPHNMSQGQMSSPHNMSQGQMSGSHNMPQSQGQMMPQSGQGMIRPPLMQP HHMMGGQNPPMGNYPANFQGYPPQMQRPPNNQQGPGPNMGPMRPGHQGMMQQVGPGQGMMGRPGMPGPLPYQHGPGMRPQ GPHDQMMRPPGNMGMHMRMGYPGQEQMMHRGPMNQHPQMGSQPSSSIPHSQGQYSGPLTSLGQMVPPGAQGPPGAPGQNM SAVTNVTTSSPSMSAGEHREMMGSYPRPPFPHSIPSQIRPDAAFMPSRPPMMNHPGGVMNPAMSGPPSLIPDSPANHMQG GMVPPPQGPRYEPYGMNGGPPPPSVTSPPPSMQGGPMPPGSAASGGGXDSPKSDGGTTEKPPVSGPHAPPSQPMQSPPPE MMGSYPRPPFPHSIPSQIRPDAAFMPSRPPMMNHPGGVMNPAMSGPPSLIPDSSANHMQGGMVPPPQGPRYEPYGMNGGP PPPSVTSPPPSMQGGPMPPGSAASGGGGGGRGFMIDNLLEKPQKSISPVDYQGRNEVATPSEQSEDSQEMSHLERIEYTS IAFQEEEGEGMSDIADIVK |
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