Gene
Gene Model ID | pfu_aug1.0_1643.1_58615 |
---|---|
Locus | scaffold1643.1 : 65984 ... 81205 : - |
To GenomeBrowser | scaffold1643.1:65984..81205 |
Genes list of scaffold | scaffold1643.1 |
Synonym | pfu_aug2.0_4382.1_09317 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1643.1_58615.t1 | 1 | 1 | Fringe | 3 | 157 | 0.0 | 158.2 | 0.0 | 0.0 | 158.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1643.1_58615.t1 | gi|328787052|ref|XP_623898.3| | PREDICTED: fringe glycosyltransferase isoform X2 [Apis mellifera] | 2.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_1643.1_58615.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1643.1_58615.t1 atgcactgatggttttgtcatgttgatgacgacaattatctaaatattgataatttactgaaaactctgaggaaatatga tcacaatagtttatggtatcttggacgtaagagcaaggagtttgctcatccacctcccgagagacccaaattaaaacaca tcagatttgtgtttgccacaacaggagctggtatgtgtctcagcagggcactagcaaataaactattcaaatttatggga aatgggagatttgtctttacggggaacgtcattgccatgccagacgactgtactctgggttacattgttaatcaccttct caagctgaatcttacttatataaaggattttcattcccatcttgaacaaatgaaagatttgaaaaatccagaacagtcta taactataggatattttaaggataatgtgattaatatagacggattttctaaaaaggacgatccaacaaggtttagatcg ttacactgtaaattgcatccggaaacatgtaaatattaa |
Protein
Protein ID | pfu_aug1.0_1643.1_58615.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1643.1_58615.t1 MHXWFCHVDDDNYLNIDNLLKTLRKYDHNSLWYLGRKSKEFAHPPPERPKLKHIRFVFATTGAGMCLSRALANKLFKFMG NGRFVFTGNVIAMPDDCTLGYIVNHLLKLNLTYIKDFHSHLEQMKDLKNPEQSITIGYFKDNVINIDGFSKKDDPTRFRS LHCKLHPETCKY |