Gene
| Gene Model ID | pfu_aug1.0_16479.1_32696 |
|---|---|
| Locus | scaffold16479.1 : 3290 ... 12144 : - |
| To GenomeBrowser | scaffold16479.1:3290..12144 |
| Genes list of scaffold | scaffold16479.1 |
| Synonym | NA |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Pfu-002138-2 |
| Description | NCBI blastx best hit to AAZ76260.1. |
| mRNA evidence |
| Study field | Biomineralization |
|---|---|
| Gene name | 002138-2 |
| Description | calcium binding |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16479.1_32696.t1 | 1 | 1 | EF-hand_7 | 17 | 68 | 1.2e-06 | 28.6 | 6.1e-10 | 1.5e-06 | 28.2 |
| pfu_aug1.0_16479.1_32696.t1 | 2 | 1 | EF-hand_6 | 17 | 39 | 4.6e-06 | 26.0 | 0.0084 | 21.0 | 5.3 |
| pfu_aug1.0_16479.1_32696.t1 | 2 | 2 | EF-hand_6 | 46 | 68 | 4.6e-06 | 26.0 | 3.2e-07 | 0.0008 | 19.0 |
Transcript
| Transcript ID | pfu_aug1.0_16479.1_32696.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16479.1_32696.t1 agagacgaaaacaaatttatcattaccctaactttgcctgcatgtgatttccacccctatgatctgaacacaagtaaagc aattgagaaaagggagctgaagttctggttcagacaagatgacccagctctggtagattcactgttcaagtctctggacg aagacggtaatggctcagtctccatgacggagtttgccgatatggcacctaaagtaataaagggttgtagcggccagagt ggaggcaaaggtggtcagcaaggagacaaaggtccaaaatag |
|
Protein
| Protein ID | pfu_aug1.0_16479.1_32696.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16479.1_32696.t1 RDENKFIITLTLPACDFHPYDLNTSKAIEKRELKFWFRQDDPALVDSLFKSLDEDGNGSVSMTEFADMAPKVIKGCSGQS GGKGGQQGDKGPK |
|