Gene
| Gene Model ID | pfu_aug1.0_16492.1_61619 |
|---|---|
| Locus | scaffold16492.1 : 13746 ... 28016 : + |
| To GenomeBrowser | scaffold16492.1:13746..28016 |
| Genes list of scaffold | scaffold16492.1 |
| Synonym | pfu_aug2.0_388.1_27339 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16492.1_61619.t1 | 4 | 1 | RVT_1 | 64 | 86 | 7.5e-09 | 35.2 | 0.7 | 5200.0 | -3.5 |
| pfu_aug1.0_16492.1_61619.t1 | 4 | 2 | RVT_1 | 154 | 228 | 7.5e-09 | 35.2 | 2.7e-08 | 0.0002 | 20.8 |
| pfu_aug1.0_16492.1_61619.t1 | 4 | 3 | RVT_1 | 252 | 332 | 7.5e-09 | 35.2 | 0.00013 | 0.97 | 8.7 |
| pfu_aug1.0_16492.1_61619.t1 | 4 | 4 | RVT_1 | 370 | 407 | 7.5e-09 | 35.2 | 0.015 | 110.0 | 2.0 |
Transcript
| Transcript ID | pfu_aug1.0_16492.1_61619.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16492.1_61619.t1 atgccggttcgcatggtgaatttatcagatgaaagtgtcaccatctataaaaatactaccattggaaccctagaaccgaa cgagtcaccaatgctatgtggcgtgggggaagcaggttgcagcccccctgtatgtatagcttctataaatacatcaagag caagtgaaatactcagaaaaattaaccttgatgacactgtggtagaaggaaacgagaaagaacagttaatcaagctgatt actgaataccaggatgttttctccttagggagcaatgatattggtcgagctgacaaagttaaacatcgaattgacacagg gagtgctctccctatacgtcaagcaccacgtcgggttccagttgcaatgaaatatgaggtcaaaaaccacattgcggaca tgctgagtaatggcattattcgtgagtcgtgtagtccttgggcttcccctattgtcctcgtcaagaagaaaggtggggga acacggttctgtatcgattacaggaaattgaatagtgtgacaaagagagatgcataccctttgccacgaatggatgatgc attagaaaccttgtctggagccaagtacttctccacactcgacctcataagtgggtactggcaagtagaggtcgatgaaa atgatcgcgacaaaacagcgttcgccactcacatggggctctatgaatttaatgtaatgccgttcggactttgtggagca ccaagggatgtgtttgacaaaatgaaatcaagaaattttgaagcaaatacgatttcttcatacgacttttctaatatgta caccaggcttcctcacgataaaataaatgatcgactgtccaaactcattaaatggtgttttgatcgagaggggaaaactt atatcagtacatctgaatcgaagggtttcttttccgccacagattacaaatcatacaaatcatggacatgtggtgacatg tgtattgccttgtccttccttttggacaatatttactcctatggtatctacatttcacagctcatccggtatgctagagc atgtactgatgctttggattttcatagtagaaatttacaaattaccaagaaacttttagttggagaccccctcctttctt ttactatcgactatcctgttttgaaatggataaaatgttatttatctacaagaattgactctaaacaaagcaaacgttat acaaacacagaaacaccatttttggacctaaatatcaaaattgtgaatggaaagattcatacaagtgtgtatgacaaaag acatgattttggattcaatgtagtaaatattccctggcttgacggtgatgttcctagattaccgtcgtacggtatctaca tttcacagctcatccggtgcgctagtaatgtcgaattgttccaactctatgccttcttgaagaaatttccaagccaattt ccatgcaccagacacgtgtttcgaatattaaattctcatcagtga |
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Protein
| Protein ID | pfu_aug1.0_16492.1_61619.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16492.1_61619.t1 MPVRMVNLSDESVTIYKNTTIGTLEPNESPMLCGVGEAGCSPPVCIASINTSRASEILRKINLDDTVVEGNEKEQLIKLI TEYQDVFSLGSNDIGRADKVKHRIDTGSALPIRQAPRRVPVAMKYEVKNHIADMLSNGIIRESCSPWASPIVLVKKKGGG TRFCIDYRKLNSVTKRDAYPLPRMDDALETLSGAKYFSTLDLISGYWQVEVDENDRDKTAFATHMGLYEFNVMPFGLCGA PRDVFDKMKSRNFEANTISSYDFSNMYTRLPHDKINDRLSKLIKWCFDREGKTYISTSESKGFFSATDYKSYKSWTCGDM CIALSFLLDNIYSYGIYISQLIRYARACTDALDFHSRNLQITKKLLVGDPLLSFTIDYPVLKWIKCYLSTRIDSKQSKRY TNTETPFLDLNIKIVNGKIHTSVYDKRHDFGFNVVNIPWLDGDVPRLPSYGIYISQLIRCASNVELFQLYAFLKKFPSQF PCTRHVFRILNSHQ |
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