Gene
| Gene Model ID | pfu_aug1.0_165.1_14834 |
|---|---|
| Locus | scaffold165.1 : 82952 ... 100745 : - |
| To GenomeBrowser | scaffold165.1:82952..100745 |
| Genes list of scaffold | scaffold165.1 |
| Synonym | pfu_aug2.0_545.1_17555 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_165.1_14834.t1 | 3 | 1 | RRM_5 | 22 | 53 | 3.9e-19 | 68.2 | 2.5e-08 | 7.3e-05 | 22.5 |
| pfu_aug1.0_165.1_14834.t1 | 3 | 1 | RRM_6 | 22 | 38 | 1.7e-16 | 59.9 | 0.42 | 1200.0 | -0.6 |
| pfu_aug1.0_165.1_14834.t1 | 3 | 1 | RRM_1 | 22 | 42 | 4.0e-15 | 55.1 | 0.00012 | 0.36 | 10.4 |
| pfu_aug1.0_165.1_14834.t1 | 3 | 2 | RRM_6 | 218 | 283 | 1.7e-16 | 59.9 | 2.4e-13 | 7.1e-10 | 38.7 |
| pfu_aug1.0_165.1_14834.t1 | 3 | 2 | RRM_1 | 226 | 283 | 4.0e-15 | 55.1 | 1.4e-06 | 0.0042 | 16.6 |
| pfu_aug1.0_165.1_14834.t1 | 3 | 2 | RRM_5 | 233 | 282 | 3.9e-19 | 68.2 | 4.1e-14 | 1.2e-10 | 41.0 |
| pfu_aug1.0_165.1_14834.t1 | 3 | 3 | RRM_6 | 344 | 394 | 1.7e-16 | 59.9 | 1.1e-06 | 0.0031 | 17.4 |
| pfu_aug1.0_165.1_14834.t1 | 3 | 3 | RRM_1 | 344 | 404 | 4.0e-15 | 55.1 | 5.2e-09 | 1.5e-05 | 24.4 |
| pfu_aug1.0_165.1_14834.t1 | 3 | 3 | RRM_5 | 365 | 393 | 3.9e-19 | 68.2 | 0.068 | 200.0 | 1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_165.1_14834.t1 | gi|345494580|ref|XP_001604099.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_165.1_14834.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_165.1_14834.t1 atgaatgattacgataatttagaaaatgattcaacaaatttattgtttaccttaacaataaatacatttgaaagcattga ttctgccaagagagccaaacagaacctgaacggagcagatatttactctggatgttgtacactaaaaatagaatttgcaa agcccacaagactgaatgtgatccgtaacgatcaggacagctgggattatactaaccctaatctagggaaggagccacaa ggtcagcagggaagacctgccccattattacaggatcctagatattctaacatacccaccccatatgaacaaaagatgaa ctcaggatacggaggtcaggccccaccacaaggaggaggtggagctgggtaccagggacaaggtgggtacagtggcccac cccagcagggatacggaagcccacagggaggatatagcccgcctggtagtgggggatatggaatgtacgatcaaggagat ggatatgggggctaccctccgtcatctagcaggcagtatgatatgggaccaccatccgataggtactcatccagcaagcc acccatgcatgatcgtggatacggacgtcccccatcgacttactctgacggtcctcctccaccagggggctctatgattc agggctcggtactgatggtgtacggtctcgacatggaacgaataaactgcgacaaacttttcaatctattctgtctgtat ggaaatgttgtcaggatcaagtttttgaagagtaaagagggctcagccatgatacagatgggggattccttggcactaga acgatgcatgcagaatctcaactacattcacttctttggatcaaaagtccagcttggacactccaaacaggctttccttc aagacgtgccgaacccccacgagcttcctgacgggagtccttcattcaaagatttcatgggcagccgaaataataggttc gctaatccagaggcagcagctaaaaatcgtatcatgtcacctaccaagactttacattacttcaatgccccacctggtct caccaaggaagaaatagaggagatgtttgagaaatgtggcacagagaagccaactaaaatcaaacagtttaatacaaaaa atgagagaagctccactggattgttacagtttgacagtaagggtgatgctatggaagctctcatctctgtcaatcattac tccctacccaaccctactggcaaaaatcccttcatcttcaaagtttgtttctccgggacaacagtagacagagagagaga ttag |
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Protein
| Protein ID | pfu_aug1.0_165.1_14834.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_165.1_14834.t1 MNDYDNLENDSTNLLFTLTINTFESIDSAKRAKQNLNGADIYSGCCTLKIEFAKPTRLNVIRNDQDSWDYTNPNLGKEPQ GQQGRPAPLLQDPRYSNIPTPYEQKMNSGYGGQAPPQGGGGAGYQGQGGYSGPPQQGYGSPQGGYSPPGSGGYGMYDQGD GYGGYPPSSSRQYDMGPPSDRYSSSKPPMHDRGYGRPPSTYSDGPPPPGGSMIQGSVLMVYGLDMERINCDKLFNLFCLY GNVVRIKFLKSKEGSAMIQMGDSLALERCMQNLNYIHFFGSKVQLGHSKQAFLQDVPNPHELPDGSPSFKDFMGSRNNRF ANPEAAAKNRIMSPTKTLHYFNAPPGLTKEEIEEMFEKCGTEKPTKIKQFNTKNERSSTGLLQFDSKGDAMEALISVNHY SLPNPTGKNPFIFKVCFSGTTVDRERD |
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