Gene
| Gene Model ID | pfu_aug1.0_16527.1_54312 |
|---|---|
| Locus | scaffold16527.1 : 9121 ... 32477 : - |
| To GenomeBrowser | scaffold16527.1:9121..32477 |
| Genes list of scaffold | scaffold16527.1 |
| Synonym | pfu_aug2.0_1.1_03344 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16527.1_54312.t1 | 1 | 1 | zf-UBR | 421 | 469 | 7.9e-09 | 35.1 | 2.7e-12 | 2.0e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16527.1_54312.t1 | gi|332024530|gb|EGI64728.1| | E3 ubiquitin-protein ligase UBR5 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_16527.1_54312.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16527.1_54312.t1 gatggtgtaggtacaaagttttcccacattgccgctatgcattctgaccttgttgctgtgggaaccaacggtcagctgta tagctggaagtggagtgatcctgaaccattccggaatccagacagtacaaacctgcatcaccctaaggccgtgtctctag gtctacagaatgagaagattgtgggtatatctgcctgtagtatgagagcctccgtctttacggagtctgacaaagtggca acctgggtcgatgagacgcttaatagtgtggcatcaaaactagagcaggcagctcagagctttacagagttccagactga taagattgtgtcgttacatacatgttctctgtacacatgtgccagactggaaagtggtgctttatattggtggtatgttt ngaggagttcgcctatgtaccacagtggtgctatagcgtttgccaccattgacggtgtaccgaaagtaggtcaactactg gagtctgcttggtcacttgccgatacatgccgatttaaaatcatgaaaactactccagttgaagtaaaacctgagccaag acctgagaccaagcagagtgagatcaaacctgagatgcccccacccccgtcccctgacagctctacgtgtagtgatcaca gcggtcccaccctcatcagtcctgcctcactcaagagaaagaaagctccaacacccatcaaagacgtggagaaaaaagac gaggagaattggcccctgaagaatgtaatatttgtagaagacgtgaagactgtacctgtcggtaaagtattaaaggttga tggggcatacgctgccgtgaagttccagaccaaggattcggagggcggagttagtaaggaggacccggctagcttactac aagactgcagactgatgagaaaggacgagttacaggtagtgaagagtgccagtgcccccagactgccagactgcttccag aaaaatcctaaaaaagtaacattatcagaaaatgggcaaatattagctgtggctgtagattgtgaaggtatccatgtgat agcgaggtccggagcacgacttagttatatagtatataacctgacgtcagggaaagtagagcaggattctgccttcccta cggnaatatctcgtactttactcatgtgtgaaggagttactgcttcagttaagggacggtgtatcggaatgaaggtccac agtcttggtaaccaaggaaacaacatgaaaaataaggcagctgtcattgttatggctgtagaggatatatttgagtgtaa gacgtgcggactgacagggtctctatgctgttgtacagaatgtgcacgagtgtgccataaaggacatgactgcaagatga agaggacgtcacctacagcgtattgtgactgctgggaaaaatgtaagtgtaaagctctgatagccggacaacaaggacca aggtttgagctcctacatcgactgttaacggaaacggatctagtcgtcctacctaacagcaggggagagaatatactatt attcctcgtacagacagtgggaagacaacttatagaacaaagacagtacagacctaataacaggacacgagtacccgtgc ccagtaggaaaaatatacctcaggatcttgatgtagaaatgccagaacacgacttagaacctcccaagttcagtcgtaag gcgttagaacgtatcctaaatgattggacggcagttaaatcaatgatgctggacacattgttgacgactttgatcagaga gatgcagaacgagaacatagaagggaggaagtcagaggccaagcaggtggcacgaagatttatacgatctgtggccagga tttacgtcgtaatcaacgtagggatggcaccagccacaggcaaaaagaaaagtgctagtataacaacctgccagcctgtg atcagatgtaagcgagcctttcaggccctcattaacatcgccctggaggagctgtgtgaaatagccgactccctgatagc tccggtcaggatgggtgtgtcccgccccactgcgcccttcaccctggctgtggctaatgtagaggccatacaaggcagtg aggagatttttaatactgaccccctaccccccaggaataatacgtctgacctagagacaaggtctgtagcgtttatatcg caggaacgattagctcagacccagcagtccagtcagagagcgacagataggggtgacgatgaaatgatgtcagctgacgt agaggagggtgaggtggtggaaggcattgtaggtgacgaccaatcagatcacgaggatagggaggaccaccaatcagagc actccgatcaagatcatgctgataatgaagcaggtaatgctgagagtgacatggatctagatttactcgccgagtccgac tcggactcggacagtgatggaggtcacagtaaccaagacaacgtcagtgtacagaggagtgctgttactgcggcaacagc tggctcagatgctggtacaggccttggtagtctggcacatttctctgaagattccggggaatcatctaatcaggaagatg attatgagagtgacaacgatcgtagcgaggacggaaatgatgccgacgacatgcattatatagatgaacaactagaaaga tgtaatacgtcaaaaatttcagatagcatggtgctatttcctcgcggtgaagcacttcgtgttgcgatgcgttgcagcgc gttgcgtcgcaacacataa |
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Protein
| Protein ID | pfu_aug1.0_16527.1_54312.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16527.1_54312.t1 DGVGTKFSHIAAMHSDLVAVGTNGQLYSWKWSDPEPFRNPDSTNLHHPKAVSLGLQNEKIVGISACSMRASVFTESDKVA TWVDETLNSVASKLEQAAQSFTEFQTDKIVSLHTCSLYTCARLESGALYWWYVXRSSPMYHSGAIAFATIDGVPKVGQLL ESAWSLADTCRFKIMKTTPVEVKPEPRPETKQSEIKPEMPPPPSPDSSTCSDHSGPTLISPASLKRKKAPTPIKDVEKKD EENWPLKNVIFVEDVKTVPVGKVLKVDGAYAAVKFQTKDSEGGVSKEDPASLLQDCRLMRKDELQVVKSASAPRLPDCFQ KNPKKVTLSENGQILAVAVDCEGIHVIARSGARLSYIVYNLTSGKVEQDSAFPTXISRTLLMCEGVTASVKGRCIGMKVH SLGNQGNNMKNKAAVIVMAVEDIFECKTCGLTGSLCCCTECARVCHKGHDCKMKRTSPTAYCDCWEKCKCKALIAGQQGP RFELLHRLLTETDLVVLPNSRGENILLFLVQTVGRQLIEQRQYRPNNRTRVPVPSRKNIPQDLDVEMPEHDLEPPKFSRK ALERILNDWTAVKSMMLDTLLTTLIREMQNENIEGRKSEAKQVARRFIRSVARIYVVINVGMAPATGKKKSASITTCQPV IRCKRAFQALINIALEELCEIADSLIAPVRMGVSRPTAPFTLAVANVEAIQGSEEIFNTDPLPPRNNTSDLETRSVAFIS QERLAQTQQSSQRATDRGDDEMMSADVEEGEVVEGIVGDDQSDHEDREDHQSEHSDQDHADNEAGNAESDMDLDLLAESD SDSDSDGGHSNQDNVSVQRSAVTAATAGSDAGTGLGSLAHFSEDSGESSNQEDDYESDNDRSEDGNDADDMHYIDEQLER CNTSKISDSMVLFPRGEALRVAMRCSALRRNT |
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