Gene
Gene Model ID | pfu_aug1.0_16539.1_68982 |
---|---|
Locus | scaffold16539.1 : 30446 ... 32379 : + |
To GenomeBrowser | scaffold16539.1:30446..32379 |
Genes list of scaffold | scaffold16539.1 |
Synonym | pfu_aug2.0_56.1_20134 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_16539.1_68982.t1 | 1 | 1 | PEX11 | 25 | 155 | 6.1e-29 | 100.8 | 4.8e-33 | 7.1e-29 | 100.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_16539.1_68982.t1 | gi|198429257|ref|XP_002129399.1| | PREDICTED: peroxisomal membrane protein 11C [Ciona intestinalis] | 2.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_16539.1_68982.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16539.1_68982.t1 atggtggagttatttttagtaaatcgaaagtacaaagtctacttccgatgtaaacaacacaccaacatggacgtagtgcg gttactggagtctcacagaggcagggacaagattgttcgtttagctacttatgcttgcatgctgctcagtggcaatggta caggcaagttccacaaacgtatggagatcctggtgagggagttaggaggatgtaggaccgttctcaggctgtttgacgat atcccaatgctcgcttctaattacatgtatggaactgggtcaaaggagaagaacatccttgtcagggcttgtagattgat caccaacttggcgtaccaggttttctttcccgtggaacatgtggcatggttgaacgacaagggtgtcatatcaggatttg tatcggccaagtgggtagtctgcagtatagctctgtgggctatagctttaatggcagacattatcag |
Protein
Protein ID | pfu_aug1.0_16539.1_68982.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16539.1_68982.t1 MVELFLVNRKYKVYFRCKQHTNMDVVRLLESHRGRDKIVRLATYACMLLSGNGTGKFHKRMEILVRELGGCRTVLRLFDD IPMLASNYMYGTGSKEKNILVRACRLITNLAYQVFFPVEHVAWLNDKGVISGFVSAKWVVCSIALWAIALMADII |