Gene
| Gene Model ID | pfu_aug1.0_16539.1_68982 |
|---|---|
| Locus | scaffold16539.1 : 30446 ... 32379 : + |
| To GenomeBrowser | scaffold16539.1:30446..32379 |
| Genes list of scaffold | scaffold16539.1 |
| Synonym | pfu_aug2.0_56.1_20134 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16539.1_68982.t1 | 1 | 1 | PEX11 | 25 | 155 | 6.1e-29 | 100.8 | 4.8e-33 | 7.1e-29 | 100.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16539.1_68982.t1 | gi|198429257|ref|XP_002129399.1| | PREDICTED: peroxisomal membrane protein 11C [Ciona intestinalis] | 2.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_16539.1_68982.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16539.1_68982.t1 atggtggagttatttttagtaaatcgaaagtacaaagtctacttccgatgtaaacaacacaccaacatggacgtagtgcg gttactggagtctcacagaggcagggacaagattgttcgtttagctacttatgcttgcatgctgctcagtggcaatggta caggcaagttccacaaacgtatggagatcctggtgagggagttaggaggatgtaggaccgttctcaggctgtttgacgat atcccaatgctcgcttctaattacatgtatggaactgggtcaaaggagaagaacatccttgtcagggcttgtagattgat caccaacttggcgtaccaggttttctttcccgtggaacatgtggcatggttgaacgacaagggtgtcatatcaggatttg tatcggccaagtgggtagtctgcagtatagctctgtgggctatagctttaatggcagacattatcag |
|
Protein
| Protein ID | pfu_aug1.0_16539.1_68982.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16539.1_68982.t1 MVELFLVNRKYKVYFRCKQHTNMDVVRLLESHRGRDKIVRLATYACMLLSGNGTGKFHKRMEILVRELGGCRTVLRLFDD IPMLASNYMYGTGSKEKNILVRACRLITNLAYQVFFPVEHVAWLNDKGVISGFVSAKWVVCSIALWAIALMADII |
|