Gene
| Gene Model ID | pfu_aug1.0_16572.1_54320 |
|---|---|
| Locus | scaffold16572.1 : 1 ... 6609 : + |
| To GenomeBrowser | scaffold16572.1:1..6609 |
| Genes list of scaffold | scaffold16572.1 |
| Synonym | pfu_aug2.0_631.1_04417 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16572.1_54320.t1 | 1 | 1 | adh_short | 49 | 191 | 1.1e-21 | 77.4 | 9.6e-25 | 1.8e-21 | 76.7 |
| pfu_aug1.0_16572.1_54320.t1 | 1 | 1 | KR | 50 | 153 | 5.9e-09 | 35.8 | 8.2e-12 | 1.5e-08 | 34.5 |
| pfu_aug1.0_16572.1_54320.t1 | 1 | 1 | Epimerase | 51 | 231 | 5.4e-09 | 35.8 | 4.8e-12 | 8.9e-09 | 35.1 |
| pfu_aug1.0_16572.1_54320.t1 | 1 | 1 | adh_short_C2 | 58 | 240 | 2.7e-08 | 33.8 | 4.5e-11 | 8.3e-08 | 32.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16572.1_54320.t1 | gi|291221555|ref|XP_002730785.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16572.1_54320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16572.1_54320.t1 cgtactgtagtttatgtctttgaaccaagtctgatgtttcgctggattgttgctgggtgtacaggagccacgctcttgat tatgatttatagaaagttgtttacacatacagcaaagtgtttaagtacaaagactttggcaggaaaagtagtgatagtga ccggtgctaacacagggattggcaaggccacatcgcaggagcttgcggagcgtcatgccaaggtgatcatggcttgccga gacatcagcaagggccagtcagctctaaaagacatcaggaaaaatacgaaaaacggaattctagtcgtcaagcagctaga cctgcagtcccaagcctctgttcgccagttttgtagccaaattcttgaagaggagccgcgactggacgttctcattaaca acgctggtgtgatggggcatccctttactttaactgaggatggagtggagattcatatggccgtaaaccacttcagtaac tttctactcactaatctattgttggatttattgaagaaatcggcacctagcagaattgtgtttgtttcttcatccctgca caaaagagggaccgtggacttttcaatgtttgacaaaaaacaaaagcatccttatgcaaacagcaagttggctaatattt actttgctcgtgcactgagtagaaatttagatgggactggagtgcgcgttcatacgttacaccctgggatggtcaatact gagctttcgcgtcattcgttatccagatttatgtgtgttttattatctcctcttgcgtggttcctcttgccgtcatcaag agagggatgtcagaccgtcgtgtattgtgccgtttcagaggagctggattacgtgacagggcgatattacggaaagtgca aagaggagccgtggactgaaatcgcgaaaagaaaactcaatgtgtaa |
|
Protein
| Protein ID | pfu_aug1.0_16572.1_54320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16572.1_54320.t1 RTVVYVFEPSLMFRWIVAGCTGATLLIMIYRKLFTHTAKCLSTKTLAGKVVIVTGANTGIGKATSQELAERHAKVIMACR DISKGQSALKDIRKNTKNGILVVKQLDLQSQASVRQFCSQILEEEPRLDVLINNAGVMGHPFTLTEDGVEIHMAVNHFSN FLLTNLLLDLLKKSAPSRIVFVSSSLHKRGTVDFSMFDKKQKHPYANSKLANIYFARALSRNLDGTGVRVHTLHPGMVNT ELSRHSLSRFMCVLLSPLAWFLLPSSREGCQTVVYCAVSEELDYVTGRYYGKCKEEPWTEIAKRKLNV |
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