Gene
| Gene Model ID | pfu_aug1.0_16642.1_61633 |
|---|---|
| Locus | scaffold16642.1 : 1 ... 16511 : + |
| To GenomeBrowser | scaffold16642.1:1..16511 |
| Genes list of scaffold | scaffold16642.1 |
| Synonym | pfu_aug2.0_93.1_10263 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16642.1_61633.t1 | 2 | 1 | SWIRM | 45 | 67 | 7.4e-30 | 102.9 | 0.87 | 4300.0 | -2.1 |
| pfu_aug1.0_16642.1_61633.t1 | 2 | 2 | SWIRM | 350 | 432 | 7.4e-30 | 102.9 | 5.4e-33 | 2.7e-29 | 101.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16642.1_61633.t1 | gi|327264503|ref|XP_003217053.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16642.1_61633.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16642.1_61633.t1 atgcgatgtttcttggacttcaaatctggcggagcactttgtcatattttagcagccgtctacaaattcaaaagtgacca aggatggagacggtttgatttccagtccccgtcacggatggacagaaatgtagagatgtttttacagatagagaaatcac tgatacagaacaagtgtcacacccctccctccatatatctaacctccgacatagataaaactctcattcctaagttaaaa gatattgtaaagcgccatcaagggacaatctgtgatgatgaagaggaggcaactcatgttatacatcctctcccacctaa aggatctgatgaagaggattatgtgaagccagttatgaagagggataagtttactatcatacattggtgttactatccgg acagctatgacacctgcgtcagtgacctacatgttgatgtagagggtgattcccccaatcatcagggaccatttgaggtg acagcgagatggttacttgacttggaggaattcaacgaatggatgaacgaagaagattactccgtggatgaggagtttga ttctaagaaaggcaagaaagtcaagacatcaaagatgacggtagatgagttacttgcaattcatgatgaaaggaaagaaa aacgagataaaaaaggcaaaaaaaggaatcgatcaccgtcaccatcacccgtacctacgtctgaaaagaaaaaaaggaaa agcacacgtacgcaggcagctcctggatcgagtagtaagaaacgcccaattaaagacgaggacgaggaggatttgacgag ggacatggatgatccgtcacctgacaccaacatacaggaagtacaacttgcaaaacaatccagcagttcccgtagtaaca aggatacagagaatcagcctgtcaaaggtggaacgataatggacctggacgaggacacaaatgataagtttaacggtgag gataaaggcgatgtagaggacacagtcgaggaagataaaaaagacaaagaagaagaagataacgtaacagagcagacaca tcacatcattatacccagctactcggcgtggtttgattataacgccatacacgctatagagagacgggcactgccggagt tctttaacgggaaaaacaagtcaaaaaccccagagatctactcggcctacagaaacttcatcctggatacataccgtcta aatcccacagagtacctgaccagtacggcgtgtagacgtaatctggccggggacgtttgtgcaataatgagagttcatgc tttcctagaacacgtcagtggtggatccaagggtcgctag |
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Protein
| Protein ID | pfu_aug1.0_16642.1_61633.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16642.1_61633.t1 MRCFLDFKSGGALCHILAAVYKFKSDQGWRRFDFQSPSRMDRNVEMFLQIEKSLIQNKCHTPPSIYLTSDIDKTLIPKLK DIVKRHQGTICDDEEEATHVIHPLPPKGSDEEDYVKPVMKRDKFTIIHWCYYPDSYDTCVSDLHVDVEGDSPNHQGPFEV TARWLLDLEEFNEWMNEEDYSVDEEFDSKKGKKVKTSKMTVDELLAIHDERKEKRDKKGKKRNRSPSPSPVPTSEKKKRK STRTQAAPGSSSKKRPIKDEDEEDLTRDMDDPSPDTNIQEVQLAKQSSSSRSNKDTENQPVKGGTIMDLDEDTNDKFNGE DKGDVEDTVEEDKKDKEEEDNVTEQTHHIIIPSYSAWFDYNAIHAIERRALPEFFNGKNKSKTPEIYSAYRNFILDTYRL NPTEYLTSTACRRNLAGDVCAIMRVHAFLEHVSGGSKGR |
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