Gene
| Gene Model ID | pfu_aug1.0_16646.1_03733 |
|---|---|
| Locus | scaffold16646.1 : 1 ... 6705 : - |
| To GenomeBrowser | scaffold16646.1:1..6705 |
| Genes list of scaffold | scaffold16646.1 |
| Synonym | pfu_aug2.0_21.1_03440 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16646.1_03733.t1 | 1 | 1 | Glyco_hydro_38 | 177 | 489 | 0.0 | 221.4 | 0.0 | 0.0 | 220.6 |
| pfu_aug1.0_16646.1_03733.t1 | 1 | 1 | Alpha-mann_mid | 496 | 581 | 5.8e-19 | 68.0 | 2.5e-22 | 1.2e-18 | 67.0 |
| pfu_aug1.0_16646.1_03733.t1 | 1 | 1 | Glyco_hydro_38C | 636 | 969 | 1.9e-27 | 96.2 | 6.6e-31 | 3.3e-27 | 95.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16646.1_03733.t1 | gi|327276575|ref|XP_003223045.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_16646.1_03733.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16646.1_03733.t1 atgtggcatgtgaggaaaaagcttatagtgggactacttttcacggtctctcttcttatcatcactattttcagaaaaga ctatttagttttgagatttgaccaaatatcggaggaaaacatccgccgtacaggtgacagacaaagcgcaaagcaagata tacatcaaagagacagccctgagcctgaaacgaacatgaggagggacacaatttcttttgaaaatacaaatttagaatcg gacaaacagaaggacaaagacagaaattcgcgtcacactgacggtaaatcgggaataaccgtcaattctgagacgtttgg cacttcttacggtaatgcacaattggataatgtacttaacaacacgtacaatgaaaatgaagtaaaagtagtagatttta aatgtactggagggtttaaaactgctaaaacagattactcaatgccggaaatcttgaataaagtgcaatatgagaaggga aggagctacgattatgatagaagtgcagacaactcatcttacttagatgtcatcattttgccacagtcgcacaacgatcc gggatggctcatgcctttcgaagcttactataaaaataaaacagtcaacatattagataacactgtgaagtatttgacaa tgtactctaagatgacaatgatctggccggaggtcatattcctggacaggtggtggagggaagcatcgacagattcacgg caaaaactaaaggctttgattgagagtggccgcctggagatcgtatccgggggttgggtatcacccgacgaggcgacctc ccattactacactgtccttgaccagctcattgagggacaccaatggctgaggaagaacataggtgtacagccggtcaata cttggccgcttgaccagtttggctactcatcttcgcttccttatatatggaagaaagccggtatgaacaatctaggtata atgagagtaactcaaaacgttaagtcatattttgctcggcataaaattatgaattttcgttggcggcagccgtgggattt gaatggagataacgatattctgtgttacgtagaaccgtacagatggtttgtgacagatgtgagttgcgggccaagtactg tcatctgcaatagtctgttgtttcataaaaagagtgagagaacgaccatgccgatgttaaatagaatttcagaaaatcta gtggaacaattcaagttgaaggcttcgcttaataaacagaaagtcatcgttgtggctctggggaatgattttgcatatga cactgttaaagaatggagagctcagtacaacaacgtaactgcacttatcaactatgttaacgataggaaaagtcaatttg gtgtgacgatgcgttttggtacagttaaggattactttaatacaattagacatttacaggaaactgacagttataaaact ttatccggggactttttcacatacgccgaggatgacatgggtacggagtattggagtgggtactttactacaagagcatt tgacaaacgaattggaaggactcttatggagcatgtcagatcggcggaaatactcactgcgtttgcgttgtcacatacag ataaaggaagtcatgatgagatggtagtgtccatgttgaaggaattggagtacgcccgtcaagccctagctctctttcag catcatgatgccatcacgggaacctctacacatagcaccgcaactgactataggaaacgcttacatatcgctctgattag ctgtggaaggataatgacacatactatacgcaaaatcattcagtcaaagacacaactccacgacctagaagttataccgc tcgttgaacagtcaaactatctcgaccaagttaaacgtagaacaataggtttagagaaggacagagtattgttagtttgg aacagttatgaacgtgcaagagacgagattgtgtgtgtactgacgaatataagtgattcagatatctctataactaagct tacaggagaggaggttgagtcccagttcaatccttactttgacggggaagggggtttatcgttagataaaatggagttat gttttaaagtaagtgtccctccttttgggggaggtttttacagaataaacatattgaatacaagtctaacggagtccaga ttagcgtccttgtggagcagtgtcagttacaataggaaagtatcatggccgcaactggaagtttcgaacaaatttacttt aagaaacacgtacttaaacgtttattttgacaagtctggtgatttacataaagtctgtagcagtacttcaaacaactctt gctcattaatctccataaactggtcatatttcatgacatcagcagatgcttacatttttgttccaaatagaatgccaaga tatttagagtctttagaacgtcatgtgtgcgtcatttccggaaatctcatatcgcgtgttattgtatctactaaacttta tcggcaggtttttacgttatataactcaaatagtctacagggaatgactgttcatatagaaaataatgtttctctcgtgg aatctagcgaaaatggaaaagaaattctaatgaatatcgtcacgaatttaaataccacgcaaaagttttacaccgattca aatagtttgtacatgctacgtcgagactggcgttcaagccttccgattggcgcgaacttttatccaatgacatctcaagc attcgttgaggaccaatcaaaaagggttacacttcattctgcacagcctttaggcgttggaagtttatttgcaggaacgt tgaatatcctcgtagacagaaagccaacgaggagcggaaaaggacttactgaagctgtgttggataacagaccaactata agtaaattctgtcttcaagtagaacattttagtaactcttttacatcgaactcatcgtctgaatcatcgatgtttccttc gatgaccagttctttcatcaatgatattttacaggctccgctgttgaattttatcatctcatctactttgaaaggttttg atttactttctcagtcgatatcctttttaaacgagcatttaccgtgtgattatacaatagctaactttagaaactttatt gacgatggtgtttggaatggctctggcataacattgcaccgcagagcaacatcatgtaaagaaaaatatgcagagtttcc ctgcagctttgatgatgacactttaagcttatataaattattcagcattttacctcatgatatttataaatctagtctta cacattttcatatttatcaaaagttggaaagatactttcgtttgaatacaatggatttagaatcatacgtaataaaatgg aaatga |
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Protein
| Protein ID | pfu_aug1.0_16646.1_03733.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16646.1_03733.t1 MWHVRKKLIVGLLFTVSLLIITIFRKDYLVLRFDQISEENIRRTGDRQSAKQDIHQRDSPEPETNMRRDTISFENTNLES DKQKDKDRNSRHTDGKSGITVNSETFGTSYGNAQLDNVLNNTYNENEVKVVDFKCTGGFKTAKTDYSMPEILNKVQYEKG RSYDYDRSADNSSYLDVIILPQSHNDPGWLMPFEAYYKNKTVNILDNTVKYLTMYSKMTMIWPEVIFLDRWWREASTDSR QKLKALIESGRLEIVSGGWVSPDEATSHYYTVLDQLIEGHQWLRKNIGVQPVNTWPLDQFGYSSSLPYIWKKAGMNNLGI MRVTQNVKSYFARHKIMNFRWRQPWDLNGDNDILCYVEPYRWFVTDVSCGPSTVICNSLLFHKKSERTTMPMLNRISENL VEQFKLKASLNKQKVIVVALGNDFAYDTVKEWRAQYNNVTALINYVNDRKSQFGVTMRFGTVKDYFNTIRHLQETDSYKT LSGDFFTYAEDDMGTEYWSGYFTTRAFDKRIGRTLMEHVRSAEILTAFALSHTDKGSHDEMVVSMLKELEYARQALALFQ HHDAITGTSTHSTATDYRKRLHIALISCGRIMTHTIRKIIQSKTQLHDLEVIPLVEQSNYLDQVKRRTIGLEKDRVLLVW NSYERARDEIVCVLTNISDSDISITKLTGEEVESQFNPYFDGEGGLSLDKMELCFKVSVPPFGGGFYRINILNTSLTESR LASLWSSVSYNRKVSWPQLEVSNKFTLRNTYLNVYFDKSGDLHKVCSSTSNNSCSLISINWSYFMTSADAYIFVPNRMPR YLESLERHVCVISGNLISRVIVSTKLYRQVFTLYNSNSLQGMTVHIENNVSLVESSENGKEILMNIVTNLNTTQKFYTDS NSLYMLRRDWRSSLPIGANFYPMTSQAFVEDQSKRVTLHSAQPLGVGSLFAGTLNILVDRKPTRSGKGLTEAVLDNRPTI SKFCLQVEHFSNSFTSNSSSESSMFPSMTSSFINDILQAPLLNFIISSTLKGFDLLSQSISFLNEHLPCDYTIANFRNFI DDGVWNGSGITLHRRATSCKEKYAEFPCSFDDDTLSLYKLFSILPHDIYKSSLTHFHIYQKLERYFRLNTMDLESYVIKW K |
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