Gene
| Gene Model ID | pfu_aug1.0_16646.1_03735 |
|---|---|
| Locus | scaffold16646.1 : 22276 ... 23871 : + |
| To GenomeBrowser | scaffold16646.1:22276..23871 |
| Genes list of scaffold | scaffold16646.1 |
| Synonym | pfu_aug2.0_21.1_03439 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16646.1_03735.t1 | 4 | 1 | Ank_5 | 2 | 31 | 2.1e-21 | 75.4 | 4.7e-06 | 0.014 | 15.6 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 1 | Ank_3 | 2 | 19 | 8.6e-15 | 53.3 | 0.0038 | 11.0 | 6.5 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 1 | Ank_2 | 4 | 32 | 4.1e-26 | 91.1 | 3.1e-05 | 0.091 | 13.1 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 1 | Ank | 4 | 22 | 7.9e-23 | 79.0 | 1.2e-05 | 0.037 | 13.8 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 1 | Ank_4 | 4 | 31 | 8.0e-20 | 70.8 | 1.8e-05 | 0.053 | 14.0 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 2 | Ank_4 | 66 | 110 | 8.0e-20 | 70.8 | 1.5e-06 | 0.0043 | 17.5 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 2 | Ank_2 | 68 | 120 | 4.1e-26 | 91.1 | 5.0e-07 | 0.0015 | 18.8 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 2 | Ank | 68 | 84 | 7.9e-23 | 79.0 | 0.0088 | 26.0 | 4.8 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 2 | Ank_5 | 75 | 129 | 2.1e-21 | 75.4 | 1.7e-07 | 0.00051 | 20.2 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 3 | Ank | 90 | 121 | 7.9e-23 | 79.0 | 0.00082 | 2.4 | 8.1 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 2 | Ank_3 | 91 | 115 | 8.6e-15 | 53.3 | 0.13 | 380.0 | 1.8 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 3 | Ank_2 | 105 | 168 | 4.1e-26 | 91.1 | 1.6e-09 | 4.8e-06 | 26.8 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 3 | Ank_5 | 121 | 162 | 2.1e-21 | 75.4 | 1.5e-06 | 0.0044 | 17.2 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 4 | Ank | 124 | 149 | 7.9e-23 | 79.0 | 1.1e-05 | 0.033 | 13.9 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 3 | Ank_4 | 124 | 168 | 8.0e-20 | 70.8 | 8.7e-06 | 0.026 | 15.0 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 3 | Ank_3 | 124 | 147 | 8.6e-15 | 53.3 | 0.0027 | 8.0 | 7.0 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 5 | Ank | 155 | 171 | 7.9e-23 | 79.0 | 0.0046 | 14.0 | 5.7 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 4 | Ank_3 | 155 | 171 | 8.6e-15 | 53.3 | 0.0015 | 4.4 | 7.8 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 4 | Ank_2 | 184 | 240 | 4.1e-26 | 91.1 | 1.6e-11 | 4.7e-08 | 33.2 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 4 | Ank_5 | 189 | 233 | 2.1e-21 | 75.4 | 4.8e-10 | 1.4e-06 | 28.3 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 6 | Ank | 195 | 226 | 7.9e-23 | 79.0 | 2.8e-10 | 8.4e-07 | 28.5 |
| pfu_aug1.0_16646.1_03735.t1 | 4 | 4 | Ank_4 | 195 | 236 | 8.0e-20 | 70.8 | 1.3e-08 | 3.9e-05 | 24.0 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 5 | Ank_3 | 195 | 223 | 8.6e-15 | 53.3 | 1.9e-09 | 5.5e-06 | 26.1 |
| pfu_aug1.0_16646.1_03735.t1 | 6 | 6 | Ank_3 | 228 | 241 | 8.6e-15 | 53.3 | 0.71 | 2100.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16646.1_03735.t1 | gi|154417199|ref|XP_001581620.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 3.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16646.1_03735.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16646.1_03735.t1 atgtacagacggtctgacatcgcaaaggtgttactgactcatggagcagacatatcagccgtggatcacttcggacgaac gccgatacaaatccttatatcattatggccgagagcaggaccatgggacaaacctggtgacacaatgatagacgaaatcg aaagagaattttggtcgcgaatgatctcaaaacacgacgagtctttgaaatgtctgcttatactactagctcacggagcc aacgcaaatcaaaaattcaacgacaacaattctaccgctctccatgtgtgttcacatagggaactattcagtgctcttga tgctttacttttgttcggagctggtatagaatatcgcgataatgacctgcgtacgcctcttctacatgcagccaaacatg ggatacacagaagtgttcgacatctgctgatacagggcgccgatcatcgcgtagaggataaagatggatgtaccgtcctg catcttctcgccgggagtaatcgcatgtccatagaggaaatgacgtcattggcgcacatattcccgcagcttttgaatac catgaactttcgcacattaaaaggtcacacatctttacatgtagcttgtcaaaacggcgatggagagaaaattaaattcc tccttgaaaataatgctgatccgaacattaaagacgatctaggaagaagcccactgtatacattacttgataataaccaa cccggacaatccgtactcggactgttgtctctactagaagtgacagtacagccgtcagttcacgacagagacggtaacct accaaaatacctactctggtgttcacggacacgatttaaacaggagttgataactaggtctcggtcgccggtgtcattgt acgccttgtgtatacagcgcgtcattggctgtctgaagaccacacgtagatcggtgctccacgtgtcacggctgcccctc cctcttacaatcagagaggagataatgtccacccaacaaagtcaccgggaattttggcaaaaattgctgttctttgtgga atctccatctaaatcaaaatga |
|
Protein
| Protein ID | pfu_aug1.0_16646.1_03735.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16646.1_03735.t1 MYRRSDIAKVLLTHGADISAVDHFGRTPIQILISLWPRAGPWDKPGDTMIDEIEREFWSRMISKHDESLKCLLILLAHGA NANQKFNDNNSTALHVCSHRELFSALDALLLFGAGIEYRDNDLRTPLLHAAKHGIHRSVRHLLIQGADHRVEDKDGCTVL HLLAGSNRMSIEEMTSLAHIFPQLLNTMNFRTLKGHTSLHVACQNGDGEKIKFLLENNADPNIKDDLGRSPLYTLLDNNQ PGQSVLGLLSLLEVTVQPSVHDRDGNLPKYLLWCSRTRFKQELITRSRSPVSLYALCIQRVIGCLKTTRRSVLHVSRLPL PLTIREEIMSTQQSHREFWQKLLFFVESPSKSK |
|