Gene
| Gene Model ID | pfu_aug1.0_16647.1_03738 |
|---|---|
| Locus | scaffold16647.1 : 39764 ... 47590 : - |
| To GenomeBrowser | scaffold16647.1:39764..47590 |
| Genes list of scaffold | scaffold16647.1 |
| Synonym | pfu_aug2.0_4.1_13341 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16647.1_03738.t1 | 2 | 1 | LMBR1 | 7 | 30 | 1.2e-07 | 30.6 | 5.2e-06 | 0.013 | 14.1 |
| pfu_aug1.0_16647.1_03738.t1 | 2 | 2 | LMBR1 | 71 | 139 | 1.2e-07 | 30.6 | 1.2e-07 | 0.00029 | 19.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16647.1_03738.t1 | gi|241631833|ref|XP_002410292.1| | LMBR1 domain-containing protein, putative [Ixodes scapularis] | 4.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_16647.1_03738.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16647.1_03738.t1 cactgtatggattgatcatattctgccagtttttgctgttgccattcatgtacttcttcttcgaggagaaagacgaagaa acttccaataaatcggcctatggaatgtcggccatgcctatggattttatcaaaggtcgacgaagtgtgaagtctgaaag gttagctgtacaaaaagacaggtcaagtatccgtgaccggctgaaagctatgagagaaaaggtattcccacttgactaca tcatgtttgctggtatcgttctgtacctggttgtctgttccatgtcagggatcagaaacattggaatctggttcttctgg ctcaggatgtacaagatccgtccccgtcgtacacgtccccagggaatcctgatgctgtgtatgattctaatgtttatgat gctggccattaacgttatagtgtatgagctgaccccacagtattcatcatacggcagtcagagatatatggtatcagtat tttattccacttcttttatcgggtggcttattttaaaacaagacagtgaaaaagccataccatatatcgggtaa |
|
Protein
| Protein ID | pfu_aug1.0_16647.1_03738.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16647.1_03738.t1 LYGLIIFCQFLLLPFMYFFFEEKDEETSNKSAYGMSAMPMDFIKGRRSVKSERLAVQKDRSSIRDRLKAMREKVFPLDYI MFAGIVLYLVVCSMSGIRNIGIWFFWLRMYKIRPRRTRPQGILMLCMILMFMMLAINVIVYELTPQYSSYGSQRYMVSVF YSTSFIGWLILKQDSEKAIPYIG |
|