Gene
| Gene Model ID | pfu_aug1.0_16655.1_32721 |
|---|---|
| Locus | scaffold16655.1 : 12937 ... 24665 : - |
| To GenomeBrowser | scaffold16655.1:12937..24665 |
| Genes list of scaffold | scaffold16655.1 |
| Synonym | pfu_aug2.0_139.1_30272 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16655.1_32721.t1 | 1 | 1 | Fcf1 | 75 | 173 | 5.9e-40 | 135.4 | 7.9874e-44 | 5.9e-40 | 135.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16655.1_32721.t1 | gi|48140222|ref|XP_397091.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16655.1_32721.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16655.1_32721.t1 atgattaacctaaaagacagtagaataaagaaggagcaccgccaaaaaaagaagagaaagaaggctaatccacagaacat gacagtgagggaaataccacaggcgtcatcggccatgtttttccagtacaacacacagctaggacctccgtaccatgtca tcgtagatactaacttcatcaacttctccatacaaaataaactggatatcatcaaatcaatgatggactgcctatatgcc aaatgtataccatacataacagattgtgtgatggctgagttggaaaaattaggatctaaatatagagtggctctcagaat tgcgagggaccctagatttaaaagattaccatgtatacacaaaggaacatacgctgatgactgtatagtgaaaagaatta ctcaacacaaatgttacattgttgcaacctgtgataaagatttaaagagaagaatcagaaagctacctggtgtacccata atgtaccttagtcaacacagatactcaatagaaaggatgcttgatgcatttgannnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnttattgcccaaaaccaatggttgcgttgtaaccctgaacttgtcaaaggtcaaggacacaatgcactcgat tggtttttttttactataa |
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Protein
| Protein ID | pfu_aug1.0_16655.1_32721.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16655.1_32721.t1 MINLKDSRIKKEHRQKKKRKKANPQNMTVREIPQASSAMFFQYNTQLGPPYHVIVDTNFINFSIQNKLDIIKSMMDCLYA KCIPYITDCVMAELEKLGSKYRVALRIARDPRFKRLPCIHKGTYADDCIVKRITQHKCYIVATCDKDLKRRIRKLPGVPI MYLSQHRYSIERMLDAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXLLPKTNGCVVTLNLSKVKDTMHSIGFFLL |
|