Gene
| Gene Model ID | pfu_aug1.0_16655.1_32722 |
|---|---|
| Locus | scaffold16655.1 : 27309 ... 36854 : - |
| To GenomeBrowser | scaffold16655.1:27309..36854 |
| Genes list of scaffold | scaffold16655.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16655.1_32722.t1 | 1 | 1 | HMGL-like | 5 | 211 | 4.8e-29 | 101.6 | 5.2e-32 | 7.7e-29 | 101.0 |
| pfu_aug1.0_16655.1_32722.t1 | 1 | 1 | PYC_OADA | 252 | 440 | 0.0 | 227.4 | 0.0 | 0.0 | 226.5 |
| pfu_aug1.0_16655.1_32722.t1 | 1 | 1 | Biotin_lipoyl | 456 | 521 | 2.2e-18 | 65.6 | 3.2e-21 | 4.7e-18 | 64.5 |
| pfu_aug1.0_16655.1_32722.t1 | 2 | 1 | Biotin_lipoyl_2 | 456 | 486 | 2.1e-08 | 33.7 | 2.0e-10 | 2.9e-07 | 30.0 |
| pfu_aug1.0_16655.1_32722.t1 | 2 | 2 | Biotin_lipoyl_2 | 493 | 507 | 2.1e-08 | 33.7 | 0.27 | 410.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16655.1_32722.t1 | gi|321463584|gb|EFX74599.1| | carboxylase:pyruvate/acetyl-coa/propionyl-CoA [Daphnia pulex] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_16655.1_32722.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16655.1_32722.t1 gagcgacatttgacgttgccatgcgttttctccacgagtgtccgtgggagaggttacagcagttacgagagcagatacct aatgtaccgttccagatgttactgagaggggctaatgccgtaggatacactaattacccagataatgtcgtatacaaatt ttgtgatttagctgtaaaacatggtatggacattttccgtatatttgactcgctcaattatttccctaacatcaaagttg gcatggaggctgtcggcaatgcaggtggtgttatcgaggcagccatatcatatactggtgacgtatcagaccccatggcc tctaagtatacattacagtactatgaggatctagccacagaactagtgaaagccggcacacacatcctgggtattaagga catggctggagtgttaaagccacgagctgccaaaatgttgattggagcactgagggacaggttcccagacatccccatcc atgtacatacacatgacacggcgtgtgccggagtggcatccatgctggcatgtgccgaagcaggtgccgatgttgtggat gttgccgtggattctatgtcaggattaacgtcacagcccagtatgggagccgttgtggcagcacttcagagaacagaact tgatacaggaatccagttatcagatgttacaaactattctgcatattgggaacagaccagaaacttgtacgctccgttcg aatgctgtaaaacactcaaaagtggaaattctgatgtatacatcaatgaaatcccaggtggacagtacactaacctacag ttccaagctttcagtctgggattggctgaccagtttgaagaagtcaagaagatgtatgctgaagccaataaactacttgg ggacgtgccaaaggtgaccccgtcatcaaaggtcgtaggtgacatggcacagtttatggtgcagaataaactgaatgcca aaatggtagaagagagagtggaggagttgtccttccctgtttcagttgtcgagtactttcagggatatctaggtcagcca ccagggggcttcccagaaccattacgtacaaagattttaaaaggaaaagagagaattgagggtcgtgctggtgaatcact cccaccaatagactttgaaggtctgaaggagagcctggaggaacgtcacgggaacatcattcgggaggtggacgtgatga gctcggcattgtatcctaaagtcacagatgatttcctagaattcagagagaagtacgggcctgtagatgctctggacacc aaaatgttttttgttggaccaaaaatggcacaagaagtagaggaattgcatttccatcctaaggctctaaagggagtacg aggatcggtcggtgcccccatgccaggcaccatagttgatatcaaggttaaatctggtgacaaggtggagaaaggacagc cactcctggtgctgagcgccatgaaaatggagatgttggtgacggcaccgtgtgctggaaccattaaaaccatccatgtg gaaaagagcatgaaaatggagggtgacgatttgcttgttgacatcgagtgtgaatag |
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Protein
| Protein ID | pfu_aug1.0_16655.1_32722.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16655.1_32722.t1 ATFDVAMRFLHECPWERLQQLREQIPNVPFQMLLRGANAVGYTNYPDNVVYKFCDLAVKHGMDIFRIFDSLNYFPNIKVG MEAVGNAGGVIEAAISYTGDVSDPMASKYTLQYYEDLATELVKAGTHILGIKDMAGVLKPRAAKMLIGALRDRFPDIPIH VHTHDTACAGVASMLACAEAGADVVDVAVDSMSGLTSQPSMGAVVAALQRTELDTGIQLSDVTNYSAYWEQTRNLYAPFE CCKTLKSGNSDVYINEIPGGQYTNLQFQAFSLGLADQFEEVKKMYAEANKLLGDVPKVTPSSKVVGDMAQFMVQNKLNAK MVEERVEELSFPVSVVEYFQGYLGQPPGGFPEPLRTKILKGKERIEGRAGESLPPIDFEGLKESLEERHGNIIREVDVMS SALYPKVTDDFLEFREKYGPVDALDTKMFFVGPKMAQEVEELHFHPKALKGVRGSVGAPMPGTIVDIKVKSGDKVEKGQP LLVLSAMKMEMLVTAPCAGTIKTIHVEKSMKMEGDDLLVDIECE |
|