Gene
| Gene Model ID | pfu_aug1.0_1669.1_08050 |
|---|---|
| Locus | scaffold1669.1 : 28736 ... 36916 : + |
| To GenomeBrowser | scaffold1669.1:28736..36916 |
| Genes list of scaffold | scaffold1669.1 |
| Synonym | pfu_aug2.0_15.1_16697 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1669.1_08050.t1 | 1 | 1 | RVT_1 | 405 | 536 | 1.0e-14 | 54.4 | 6.9e-18 | 2.0e-14 | 53.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 2 |
Transcript
| Transcript ID | pfu_aug1.0_1669.1_08050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1669.1_08050.t1 atgacgtacatcttccagagacaacgaacgagtaaagggtctgcattcatcttccgttctgtacgatttttatacgttgc attaccgttttatccgttgtatctccgttactcgtatggtgaagtctgttacacgtccgttactttacccgatagacgat tacggtccgaaacttgtgactttggtgatgaagacgcagtcaatgagcaaataagagaccaggtcattgagaaatgtgta tcacaccatcttcgtcgtaagttactggagaaaggccgaggtcttacacttgatcagctgaaacaggcagctatggctat agaagaatcagacagacaagccaaagctatggaagcgataggaagatcttgcaataattgcaaaattgagggacattttg agttatgttgtaagaaaaaagtcaaagacgacagtcgtaaagggaaaaaggaagtccgtcagttaactcagaatgaacca gatggggaacataaatatgcatttttggtgattcataaagtagattcgaagcgagatggtattgactcagtatgtgtcaa cataggaggcatagatttgtctgcagtcatagattccggagctacatgcaatgtgatggatcgagcgcagtgggaagatc taaagcgtcaaaatgtaatctgcacttcgacgaaggaatcaaagccgctattcgcatatggcagtaaaactccacttccg gttgcgggttcgattaaagctaccgtgagagctaataattgtgagttactcgacgcagaatgcattgtgatcgaaggaga tggtcaatgcttattgggtcgcgacacggcaacaaaacttaaccttcttcgattaggaccagaagtgaatgcagtttcgg gtgacggttctaccgggaagcatcctgttcttactaagtatgcatccgcgttcacgggtcttggcaaactgaaggatttc aagctagaagtaccgattgatcgagattttgaacctgtagttcaacctgtgcgcagaattccgttttcgctttgcgatag acttgaacaaaagcttgatgagctagagaacttagagaacattatcgaaaaggcgacaggccctacgacatgggtatctc ctgttgtcgtgttaccgaaaggtcaagatgacattcgcatctgtgttgacatgagaaaggccaattccgcagtaaatcgc gaacggtaccccattccaactatggcagaagtgctgcaagatatgaatcatgggaaagtatttagtaaaatagacataaa tcttgcctaccaccagattgaattatctgaaaattgtagggacataactacttttgcaacccataaagggctatataggt ataaaagattgatgcttggtatttcatgcgcacctgaaatgtaccagaaagtgcttagtacaatattgcaagattgtgag ggtgttgaaaatttcatggatgatattgttgtttatggtgaaaatgaaagtgagcacaatgttagattagagagagctat tgagagattagttgagaaaggcttcacgcttaatccagacaagtgtcagttctgtatgtcgaaaattgagtacttgggtc atgtactttctggtaagggcatatatttgcacgaagacaaggttaaggccattatagatgctagggaacctgagagtgct agtgaagttaaaagcttccttggtttggtcaacttctgtgcaaaattcattccagatttggctactatcaatgaaccttt gcgaaatctaactaaaaagggggttccctttaagtggggtaaagaacagcagaaatctttcaatcttttgaaggatcact tgtcaaaggcagatacattaaggtatttcgacaagaatgctcctactcagattattacggatgctagtccagtaggtctc gaagcggtgcttgtacagaaacaaggtcatgagttaaagaagatcctgacaataatctcaacagcactcacaatagagca ccaaattgagcatcgacgaacccctagcaagccagaggtgggaccaggtgcccgggaggagtacgcatcccctgttggct ag |
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Protein
| Protein ID | pfu_aug1.0_1669.1_08050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1669.1_08050.t1 MTYIFQRQRTSKGSAFIFRSVRFLYVALPFYPLYLRYSYGEVCYTSVTLPDRRLRSETCDFGDEDAVNEQIRDQVIEKCV SHHLRRKLLEKGRGLTLDQLKQAAMAIEESDRQAKAMEAIGRSCNNCKIEGHFELCCKKKVKDDSRKGKKEVRQLTQNEP DGEHKYAFLVIHKVDSKRDGIDSVCVNIGGIDLSAVIDSGATCNVMDRAQWEDLKRQNVICTSTKESKPLFAYGSKTPLP VAGSIKATVRANNCELLDAECIVIEGDGQCLLGRDTATKLNLLRLGPEVNAVSGDGSTGKHPVLTKYASAFTGLGKLKDF KLEVPIDRDFEPVVQPVRRIPFSLCDRLEQKLDELENLENIIEKATGPTTWVSPVVVLPKGQDDIRICVDMRKANSAVNR ERYPIPTMAEVLQDMNHGKVFSKIDINLAYHQIELSENCRDITTFATHKGLYRYKRLMLGISCAPEMYQKVLSTILQDCE GVENFMDDIVVYGENESEHNVRLERAIERLVEKGFTLNPDKCQFCMSKIEYLGHVLSGKGIYLHEDKVKAIIDAREPESA SEVKSFLGLVNFCAKFIPDLATINEPLRNLTKKGVPFKWGKEQQKSFNLLKDHLSKADTLRYFDKNAPTQIITDASPVGL EAVLVQKQGHELKKILTIISTALTIEHQIEHRRTPSKPEVGPGAREEYASPVG |
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