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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_16692.1_03746
Locus scaffold16692.1 : 20515 ... 30460 : -
To GenomeBrowser scaffold16692.1:20515..30460
Genes list of scaffold scaffold16692.1
Synonym pfu_aug2.0_26925.1_20001

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_16692.1_03746.t1 1 1 UPF0029 162 238 1.1e-09 37.9 1.6e-13 2.4e-09 36.8

Transcript
Transcript IDpfu_aug1.0_16692.1_03746.t1
Definition-
>pfu_aug1.0_16692.1_03746.t1
tccgaatgaagacctgtcgaagtcggtacctgatgccattaaaagccacctaggaattgatgcgaaattcgtacgcattc
acagaaatgggtttaaacgtggatttggcggaaaacctatttcaataacaggaaagctagaagatcgcaaccaaaaagac
caaattttagctgccatgaaggagaagaaatctacaggtgaaagacttccgtttcacatcacggctcaagaaccgccgca
gcttatcgaagaaagaaaaaaactctatgaaaaatcaaattctttccgaaaacagaacattaacactcgaatatcaggca
aacacataattttgcctaatggaagtcagtatgctgaagaaattcccctcttgacaaacgcagatgttctacaaataccg
gaaacggaacaacgaaacctcgaaaacgtccggatgtatacaactgaatgcgaggagagacaaggaacgcaaatgtttgc
ttccggttctgaagtgcgctccatagatgatgttcagaatttgtatcggaaagtgtgtattttgccagattctgccagtt
ccgatcatagaattcttgtatatagatttaaggatgaagctaggaagttaaccgaaaactatcacgatgatggcgaacat
ggcgctgggcgacgcttactccagtatatgagggacaatgaaatgtgtaacattgcggttgttatctcaaaatggaatgt
taaacataattttacaaaaccttacaggaagcaagtactcaagatcatctaccaagattttgtttttgtcccgccaacaa
acgtgaccgccgagggctctgattggctgacgcattctcaagttctctgcaacagctgcatagaatttcacgaaacctta
caggaagcaagtactcaagggcctccaccaaattgtccactatcattttttgtttgcaactcagatgagcgatgtgggcc
tcttgtttaa

Protein
Protein IDpfu_aug1.0_16692.1_03746.t1
Definition-
>pfu_aug1.0_16692.1_03746.t1
PNEDLSKSVPDAIKSHLGIDAKFVRIHRNGFKRGFGGKPISITGKLEDRNQKDQILAAMKEKKSTGERLPFHITAQEPPQ
LIEERKKLYEKSNSFRKQNINTRISGKHIILPNGSQYAEEIPLLTNADVLQIPETEQRNLENVRMYTTECEERQGTQMFA
SGSEVRSIDDVQNLYRKVCILPDSASSDHRILVYRFKDEARKLTENYHDDGEHGAGRRLLQYMRDNEMCNIAVVISKWNV
KHNFTKPYRKQVLKIIYQDFVFVPPTNVTAEGSDWLTHSQVLCNSCIEFHETLQEASTQGPPPNCPLSFFVCNSDERCGP
LV

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