Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_16706.1_18371
Locus scaffold16706.1 : 1 ... 3076 : +
To GenomeBrowser scaffold16706.1:1..3076
Genes list of scaffold scaffold16706.1
Synonym pfu_aug2.0_621.1_04404

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_16706.1_18371.t1 1 1 Lectin_C 49 119 2.3e-10 41.0 1.8e-14 2.6e-10 40.8

Transcript
Transcript IDpfu_aug1.0_16706.1_18371.t1
Definition-
>pfu_aug1.0_16706.1_18371.t1
ggcctgtgtaaagaagagtcactgcttgggattccagtacaaaggaaatatctgtaaactggtgtcttacttttgggaag
atgacattgatacaattctcgatttagacttctcaaactgcttcgtggacagtggtattttaatgattgaccacatctat
atcggagcatcagacattgctaacgaaggagactggagatgggaagatggaagtcttgtagtttaccatgatttcttcag
tcaagagcctaacaacttcgacagaaattacccgtcagagaaggccgattgtgtcgcgttcagtcgacaatggagtgacg
tatactgtggaagatcgtttccttttatctgtcagaagacttggtga

Protein
Protein IDpfu_aug1.0_16706.1_18371.t1
Definition-
>pfu_aug1.0_16706.1_18371.t1
ACVKKSHCLGFQYKGNICKLVSYFWEDDIDTILDLDFSNCFVDSGILMIDHIYIGASDIANEGDWRWEDGSLVVYHDFFS
QEPNNFDRNYPSEKADCVAFSRQWSDVYCGRSFPFICQKTW

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