Gene
| Gene Model ID | pfu_aug1.0_1673.1_58631 |
|---|---|
| Locus | scaffold1673.1 : 56815 ... 64355 : - |
| To GenomeBrowser | scaffold1673.1:56815..64355 |
| Genes list of scaffold | scaffold1673.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1673.1_58631.t1 | 2 | 1 | Sushi | 51 | 102 | 9.8e-17 | 61.0 | 8.0e-14 | 1.2e-09 | 38.3 |
| pfu_aug1.0_1673.1_58631.t1 | 2 | 2 | Sushi | 111 | 161 | 9.8e-17 | 61.0 | 1.4e-10 | 2.1e-06 | 27.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1673.1_58631.t1 | gi|344272068|ref|XP_003407858.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Loxodonta africana] | 9.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_1673.1_58631.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1673.1_58631.t1 atgcgaaacgggtctgcgatacaaacgtttcgtctccttgggattctgcttattctaaggaaaacgttctttaaggttct tgtcttatcgacttcatacaaagtagtgaatcttttatgtcaaacgtttatcgacctgctttcgtttgactgtggaaatc catccgcgatttccgatgcatcttacacaacttctggtaacaccttgtatcaggccacggctacatactcatgcaattcc ggctatgacgcatctaccaactctcgtacgataacatgtcaggcctctggatcatggtccacgacatctcttgtctgtaa cagaaaagattgtggagcgccctctagtatcacagacagctccgttagttacactacaactactgatggaagcacggcca cgtacggctgtgacacaggatacaatccgtccaccaacgcactcaccatcacgtgtaacgtgggcgggtggtcatcaaac gctgcaattacatgtattatcaatgatgatccagatcataattctatgaaattgtttgttaaggatgctttctcctggcg agctaaacagaaaacgttctag |
|
Protein
| Protein ID | pfu_aug1.0_1673.1_58631.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1673.1_58631.t1 MRNGSAIQTFRLLGILLILRKTFFKVLVLSTSYKVVNLLCQTFIDLLSFDCGNPSAISDASYTTSGNTLYQATATYSCNS GYDASTNSRTITCQASGSWSTTSLVCNRKDCGAPSSITDSSVSYTTTTDGSTATYGCDTGYNPSTNALTITCNVGGWSSN AAITCIINDDPDHNSMKLFVKDAFSWRAKQKTF |
|