Gene
| Gene Model ID | pfu_aug1.0_16741.1_03753 |
|---|---|
| Locus | scaffold16741.1 : 15319 ... 19115 : - |
| To GenomeBrowser | scaffold16741.1:15319..19115 |
| Genes list of scaffold | scaffold16741.1 |
| Synonym | pfu_aug2.0_452.1_07542 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16741.1_03753.t1 | 1 | 1 | Arf | 6 | 169 | 5.6e-14 | 51.7 | 5.5e-17 | 7.4e-14 | 51.3 |
| pfu_aug1.0_16741.1_03753.t1 | 1 | 1 | Ras | 7 | 172 | 1.4013e-45 | 155.4 | 0.0 | 1.4013e-45 | 155.2 |
| pfu_aug1.0_16741.1_03753.t1 | 1 | 1 | Miro | 7 | 126 | 2.6e-19 | 69.8 | 3.0e-22 | 4.0e-19 | 69.2 |
| pfu_aug1.0_16741.1_03753.t1 | 1 | 1 | Gtr1_RagA | 7 | 140 | 1.5e-06 | 27.5 | 1.3e-09 | 1.7e-06 | 27.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16741.1_03753.t1 | gi|242013254|ref|XP_002427327.1| | GTP-binding nuclear protein RAN1, putative [Pediculus humanus corporis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_16741.1_03753.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16741.1_03753.t1 atgtcagaggtgctatttaaagtcatcataatcggtgatcctacagtggggaaaacatcatttgtacagagatatgtcag cgattcttaccgcagggattataagatgacgattggggttgactttgccctaaaagttgtgaaatggtctgaaaatcaaa caatcaagctacagctctgggacattgctggccaggaaagattcacttcaatgaccagagtgtactacaaggacgcccat gcttgtatagttatgtttgacctcactcagaggtcaacgtttgccaatgccatcaaatggaaaaaagatctggaccaaaa atgctctcttcctgatgggtcatgtgtaccatgcttactcttagctaataagtgtgatctgagtcatagagaggtagatc agaacgagatagaggacatgtgtaaagaacacgactttgtgggctggacagaaacgtccgtcaaagaggggaaaatgata gacgagtctatgagatttttaatagaggagatgatgtcaaagcatgctgagtttgatggtttctctaacagtatgatggc gtccggtggcccaggaggtatacatctacgatccaccaaccctcctctacaacccacatcacgctgcagctgctga |
|
Protein
| Protein ID | pfu_aug1.0_16741.1_03753.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16741.1_03753.t1 MSEVLFKVIIIGDPTVGKTSFVQRYVSDSYRRDYKMTIGVDFALKVVKWSENQTIKLQLWDIAGQERFTSMTRVYYKDAH ACIVMFDLTQRSTFANAIKWKKDLDQKCSLPDGSCVPCLLLANKCDLSHREVDQNEIEDMCKEHDFVGWTETSVKEGKMI DESMRFLIEEMMSKHAEFDGFSNSMMASGGPGGIHLRSTNPPLQPTSRCSC |
|