Gene
| Gene Model ID | pfu_aug1.0_168.1_29122 |
|---|---|
| Locus | scaffold168.1 : 36784 ... 56615 : - |
| To GenomeBrowser | scaffold168.1:36784..56615 |
| Genes list of scaffold | scaffold168.1 |
| Synonym | pfu_aug2.0_1029.1_31372 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_168.1_29122.t1 | 2 | 1 | SPATIAL | 52 | 67 | 8.4e-32 | 110.8 | 2.6e-07 | 0.0019 | 18.2 |
| pfu_aug1.0_168.1_29122.t1 | 2 | 2 | SPATIAL | 71 | 194 | 8.4e-32 | 110.8 | 8.9e-30 | 6.6e-26 | 91.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_168.1_29122.t1 | gi|291238484|ref|XP_002739159.1| | 3.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_168.1_29122.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_168.1_29122.t1 atgagccagtcggaggtgtttgtcccgactggaggggatctgcacgcccgaccgggccctgtggaccagggctacatggc gtccatggacaccttcaggaagcgcccctccacacagtcaggctacagatttggtcaacttagtcagaactccttcttca cgaggcacaatccacacccagcaagggtcagacatataaaagttcctgtaacagaggcttggaggaatgagttggcggct ctgacccgagcattaggcgctgaacctgatgacgtgacagcccaaagagacccgacacagccaatggaaagaccgaaaac catgtactcagaaacaacgggaagactgattcccccgccatcacgtgcaatgtcacgtggtcagtcccgacaagcttcac ggcaaggcaggatgggacagctgcaacacatagctgctgaaccagatatggaggcaatggtactgtccatgctgtgtcag atattacagacagaggatgtcaatgctgtacaagcttggctagtgtccgccggagatagagagaagactatagtgatgga cctgatcaaagccgccatgtcgggtaaggacgattactatcaacgtgatatgaaccaggaattcctggaggaacaaacca gaaccaaactgccaccaatcaacgaaacccaaaaaccatcaggagcagacgacaatattgaccttattaaacattacgac agactggtattagacgatgagggtgttcccggggagccaagcatggacgctgtgaggaagacagagggaccgatggtggt accagctccgcctccccaggtgccacagccacccgtcatcaaggaggtagtcagagatcccatggacgatatcagtgcca tcactcttactttgataccaattgcaaatgtcttgtccttcaaacgtacaagtcaccacgtctttggaatctgcgggaaa attcgtaatgttgcattaattcgttgttttatcaagccgaatgttttttaa |
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Protein
| Protein ID | pfu_aug1.0_168.1_29122.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_168.1_29122.t1 MSQSEVFVPTGGDLHARPGPVDQGYMASMDTFRKRPSTQSGYRFGQLSQNSFFTRHNPHPARVRHIKVPVTEAWRNELAA LTRALGAEPDDVTAQRDPTQPMERPKTMYSETTGRLIPPPSRAMSRGQSRQASRQGRMGQLQHIAAEPDMEAMVLSMLCQ ILQTEDVNAVQAWLVSAGDREKTIVMDLIKAAMSGKDDYYQRDMNQEFLEEQTRTKLPPINETQKPSGADDNIDLIKHYD RLVLDDEGVPGEPSMDAVRKTEGPMVVPAPPPQVPQPPVIKEVVRDPMDDISAITLTLIPIANVLSFKRTSHHVFGICGK IRNVALIRCFIKPNVF |
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