Gene
| Gene Model ID | pfu_aug1.0_16813.1_03763 |
|---|---|
| Locus | scaffold16813.1 : 1 ... 11920 : + |
| To GenomeBrowser | scaffold16813.1:1..11920 |
| Genes list of scaffold | scaffold16813.1 |
| Synonym | pfu_aug2.0_170.1_00369 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16813.1_03763.t1 | 2 | 1 | zf-H2C2 | 37 | 71 | 5.0e-08 | 32.2 | 1.7e-11 | 6.4e-08 | 31.8 |
| pfu_aug1.0_16813.1_03763.t1 | 2 | 1 | rve | 89 | 202 | 2.1e-28 | 98.8 | 2.1e-31 | 7.6e-28 | 97.0 |
| pfu_aug1.0_16813.1_03763.t1 | 2 | 2 | zf-H2C2 | 176 | 186 | 5.0e-08 | 32.2 | 0.19 | 690.0 | -0.3 |
| pfu_aug1.0_16813.1_03763.t1 | 2 | 2 | rve | 318 | 336 | 2.1e-28 | 98.8 | 0.43 | 1600.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16813.1_03763.t1 | gi|221091812|ref|XP_002169122.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_16813.1_03763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16813.1_03763.t1 acaacgtcctatatcgttacattcctgggaacatccatggggcagaggttgtcattaagggcagggaacgaagtgtcatc tcggagttccatgacggagcctttggaggccacagtggagtcaacaagaccatcgcagctattaagatccgatactggtg gcttggtcttacagatgatgtgaaagcttatattcgctcctgtgagaagtgtcagaagtcagatccactgaagcctgcac caaagcctgaactacagcctatcaaggtttcacaaccatttgagatgataggggtggatttagttggtcctttggcagag acaacctcagggaacagatacattttcactgcaactgacttcttctccaagtgggttgaagccttcccgatcccgtccaa gacagcagaagatgtttctcgttgtatgatgaaactcttctgtcgttttggtgctgtgaaagctgttttgacagaccaag gaagagagtttgtaaacgaagttaatagacagctatgcaagtcatggaaggtcacacacaagatgacggctgcctaccat ccacagaccaatggactggatgaaaggaccaaccaaaccataaaaacagctttgagaaaggtggtgaaccagaaccagag cgactgggatgaacacttggatggagtactgttttcactgagaacgaagccgcagtcctccaccaagttttccccattct ttctgttgtatgggagagaggcactttaccctagccaactgactgaaacatttgatttgactgagattccaacaatcgag gaccaagaggagacaatgacaagacgccaagaacagattgacataacagagacggaggtgaagagcaacatagccgcagc ccaggagaagcagaaggaggattatgccaagagaaagaggggaagccgctacgtagagctgaaggaaggtgataaggtcc tcctacacaacacaaagaaatataccaagaagagcaagggcaatctggagacaaactacactggcccatatgtcatttgc agtgtacagaagaagactgcccagctgaaggacctgaaaggagctgtactgaagacaagagtaaacatcgacagactgaa ggccttcaaggatggacctgca |
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Protein
| Protein ID | pfu_aug1.0_16813.1_03763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16813.1_03763.t1 NVLYRYIPGNIHGAEVVIKGRERSVISEFHDGAFGGHSGVNKTIAAIKIRYWWLGLTDDVKAYIRSCEKCQKSDPLKPAP KPELQPIKVSQPFEMIGVDLVGPLAETTSGNRYIFTATDFFSKWVEAFPIPSKTAEDVSRCMMKLFCRFGAVKAVLTDQG REFVNEVNRQLCKSWKVTHKMTAAYHPQTNGLDERTNQTIKTALRKVVNQNQSDWDEHLDGVLFSLRTKPQSSTKFSPFF LLYGREALYPSQLTETFDLTEIPTIEDQEETMTRRQEQIDITETEVKSNIAAAQEKQKEDYAKRKRGSRYVELKEGDKVL LHNTKKYTKKSKGNLETNYTGPYVICSVQKKTAQLKDLKGAVLKTRVNIDRLKAFKDGPA |
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