Gene
| Gene Model ID | pfu_aug1.0_16837.1_54346 |
|---|---|
| Locus | scaffold16837.1 : 1 ... 10489 : + |
| To GenomeBrowser | scaffold16837.1:1..10489 |
| Genes list of scaffold | scaffold16837.1 |
| Synonym | pfu_aug2.0_2912.1_09013 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16837.1_54346.t1 | 2 | 1 | Ldl_recept_a | 4 | 42 | 6.9e-11 | 41.8 | 1.2e-08 | 0.00018 | 21.3 |
| pfu_aug1.0_16837.1_54346.t1 | 2 | 2 | Ldl_recept_a | 47 | 85 | 6.9e-11 | 41.8 | 3.1e-10 | 4.6e-06 | 26.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16837.1_54346.t1 | gi|195474641|ref|XP_002089599.1| | GE19184 [Drosophila yakuba] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_16837.1_54346.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16837.1_54346.t1 agactggtccttgtcgagaaggttatcgtaaatgttctatctctaaaagatgtgtgccactagagttatggtgtaacgga gttaaggattgtggacccgatgacaatagtgacgaaaagagtgactgtgatgatttcccatgtcgtccaggatacagaag atgtgcagtctcaaaacattgtgtgccctctgactggtggtgtgatgggaacctggattgtggctatggtgataccactg atgaaccaaatgattgcgatctgtgcaatgactttgcaaagaatgagacgctgactctccccctgcacgtagtctcactt ttggatgttattctttcagaggttcgaatcgttccactgggaattcgaattattttacctagccttttcgtctttgagat tgaatag |
|
Protein
| Protein ID | pfu_aug1.0_16837.1_54346.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16837.1_54346.t1 TGPCREGYRKCSISKRCVPLELWCNGVKDCGPDDNSDEKSDCDDFPCRPGYRRCAVSKHCVPSDWWCDGNLDCGYGDTTD EPNDCDLCNDFAKNETLTLPLHVVSLLDVILSEVRIVPLGIRIILPSLFVFEIE |
|