Gene
| Gene Model ID | pfu_aug1.0_1684.1_08056 |
|---|---|
| Locus | scaffold1684.1 : 25956 ... 37094 : + |
| To GenomeBrowser | scaffold1684.1:25956..37094 |
| Genes list of scaffold | scaffold1684.1 |
| Synonym | pfu_aug2.0_26.1_20075 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1684.1_08056.t1 | 4 | 1 | CARD | 16 | 68 | 1.3e-08 | 34.5 | 5.5e-08 | 0.00081 | 19.1 |
| pfu_aug1.0_1684.1_08056.t1 | 4 | 2 | CARD | 121 | 197 | 1.3e-08 | 34.5 | 4.0e-07 | 0.0059 | 16.4 |
| pfu_aug1.0_1684.1_08056.t1 | 4 | 3 | CARD | 394 | 413 | 1.3e-08 | 34.5 | 0.37 | 5600.0 | -2.8 |
| pfu_aug1.0_1684.1_08056.t1 | 4 | 4 | CARD | 495 | 509 | 1.3e-08 | 34.5 | 0.56 | 8300.0 | -3.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1684.1_08056.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1684.1_08056.t1 atgtataatgaaagaaaacatgtcaagaatattgaaactaaagatgttgttagagagaactacagttggttagtagaaaa tatttatccaaacgatatccttgatgatttgatcgcaaaagacatattgaagggcaggcaagccgaaatcattcacacat tgagacaaaatcacaaagctgtagatatcattataaaagaagtgatccgaatgtcagagaaggatccttctgtagcggat gattttctggatatcattgaagcgaggtgtcaatgcactaggagtagattggaacagaatgtcagaagaaaagatagtaa agattttcagagaacatatgatttagatcgttttaagcgagacttggattctaactatgacaagtttgtggaagaaatcg acccagatagtgtagcaaacatgatgtttgaagatggcggactaggagcctacgagcacgataaaataatacatgacgaa cgcacatccttcagagcaaaagagttgatgaatattgtgtgtgcggagaagaaaaggctttcaagctttcttgctgcatt gcaaaaatcagagcaaatgcatcttctgcaaagcgatacggcagaaggcacagaatcaatggaaacagaagaaagtctca aagttaatatatctacgcctttttcctgcgcagaaagtcgcttttgtggcaatggccagatcaccagaatggaagtcgaa agtgtatttgaaacaagcgacatggaaggaattgaagaacctatcattggagcattcaagattccaacgacggaaaaagt gtgtgaagtagaaacatacacagcaagataccttgactttacaatagatggtgtcagcaatggatcgcttcacatatgcc tgatacctttgttaacaaaaccaaagaaggagatatttgaaatattggcaaaggacggattaccaaagcttttcatctta ctcttgtcactaccagatgttcgagcacatctccaatctggaaaatttaacataagatctaaaatcaagatccaatatgg aaaaccagatgcagatctttcatcacaagatgagtcgtcgttcctgtcaatggttccatatgttgccgataagtgttcca gcagtttcgtacttaagaaacttagccaaaatacggacgtcccggatgatgctctcttggagctggaaagaatatctgtc aatgagacgagaccaaaagggaccttgatgcttcttcgacaaatgttcgagagtagaaaaattccattgcctctcatcaa tgcttcactgaaggacgtacttggaaaagaggatgcagatggaattttccatttatgcccatactgcgtcaaacgccaga tattggacaatttcgactttcttatcaaagaaatggactcaagatcgatgatatttttctctcacgtaatcaccatcttc gctgggtattcgttggataaccgtaacctgacgcaaggttgtagaatgcagagagcccggcgggtgctgttagttgcctt acggaagaacgaccatgttgtctttctagcccatgtactcatcattcatggtctcgatacttggctccaaaaacgaccgt gttcaaaactagccggtaaaagaatagatggttttccattagccaaaatttgccaaagttacctcccttcggcggccata ttgtatgacaatatcggaaattttcttcataattcaaccaatttatga |
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Protein
| Protein ID | pfu_aug1.0_1684.1_08056.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1684.1_08056.t1 MYNERKHVKNIETKDVVRENYSWLVENIYPNDILDDLIAKDILKGRQAEIIHTLRQNHKAVDIIIKEVIRMSEKDPSVAD DFLDIIEARCQCTRSRLEQNVRRKDSKDFQRTYDLDRFKRDLDSNYDKFVEEIDPDSVANMMFEDGGLGAYEHDKIIHDE RTSFRAKELMNIVCAEKKRLSSFLAALQKSEQMHLLQSDTAEGTESMETEESLKVNISTPFSCAESRFCGNGQITRMEVE SVFETSDMEGIEEPIIGAFKIPTTEKVCEVETYTARYLDFTIDGVSNGSLHICLIPLLTKPKKEIFEILAKDGLPKLFIL LLSLPDVRAHLQSGKFNIRSKIKIQYGKPDADLSSQDESSFLSMVPYVADKCSSSFVLKKLSQNTDVPDDALLELERISV NETRPKGTLMLLRQMFESRKIPLPLINASLKDVLGKEDADGIFHLCPYCVKRQILDNFDFLIKEMDSRSMIFFSHVITIF AGYSLDNRNLTQGCRMQRARRVLLVALRKNDHVVFLAHVLIIHGLDTWLQKRPCSKLAGKRIDGFPLAKICQSYLPSAAI LYDNIGNFLHNSTNL |
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