Gene
| Gene Model ID | pfu_aug1.0_16849.1_69009 |
|---|---|
| Locus | scaffold16849.1 : 36946 ... 44106 : + |
| To GenomeBrowser | scaffold16849.1:36946..44106 |
| Genes list of scaffold | scaffold16849.1 |
| Synonym | pfu_aug2.0_1085.1_18077 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16849.1_69009.t1 | 1 | 1 | Histone | 38 | 104 | 1.3e-19 | 70.0 | 6.9e-23 | 2.6e-19 | 69.1 |
| pfu_aug1.0_16849.1_69009.t1 | 1 | 1 | CBFD_NFYB_HMF | 45 | 102 | 8.1e-06 | 25.8 | 5.2e-09 | 1.9e-05 | 24.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16849.1_69009.t1 | gi|340931829|gb|EGS19362.1| | 4.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16849.1_69009.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16849.1_69009.t1 atggctccgaagaagtcgaaaagtaaatcaaagcaaagaatttccccagtttcaacgacgagtagaaagaagcaaaggaa aggaggaaaaaagaacgacaaaaaggcgaaaaagcggactttcagttcttatatattccgagtacttcgagaggtgaaac cagggatggaaatatcgagtaagtcaatgtcagtgatgaacagttttatgaatgacatgtttgaccgtattgctgcagag gcagctaagctagccaagcgtggtaagaaacggacattgtccagcagggagatccagaccgctgtccgtttgatacttcc cggagagctggccaagcatgcagtcagtgaagggaccaaggcagtggccaagtataccagtagcataaccgctagtatct atacacttttgcgaccggtgtttaagggcctcaataccacttttaaagaattccttatctggactggtcagaaagccatc cactgcaagtatgacgtcatcatcggacgaaagtgggtgctagaaatagctgctttcagatga |
|
Protein
| Protein ID | pfu_aug1.0_16849.1_69009.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16849.1_69009.t1 MAPKKSKSKSKQRISPVSTTSRKKQRKGGKKNDKKAKKRTFSSYIFRVLREVKPGMEISSKSMSVMNSFMNDMFDRIAAE AAKLAKRGKKRTLSSREIQTAVRLILPGELAKHAVSEGTKAVAKYTSSITASIYTLLRPVFKGLNTTFKEFLIWTGQKAI HCKYDVIIGRKWVLEIAAFR |
|