Gene
| Gene Model ID | pfu_aug1.0_16856.1_69012 |
|---|---|
| Locus | scaffold16856.1 : 26195 ... 30105 : - |
| To GenomeBrowser | scaffold16856.1:26195..30105 |
| Genes list of scaffold | scaffold16856.1 |
| Synonym | pfu_aug2.0_7199.1_32938 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16856.1_69012.t1 | 1 | 1 | RVT_1 | 286 | 424 | 5.0e-20 | 71.7 | 8.7e-24 | 1.3e-19 | 70.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16856.1_69012.t1 | gi|301618694|ref|XP_002938748.1| | 2.0e-40 |
Transcript
| Transcript ID | pfu_aug1.0_16856.1_69012.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16856.1_69012.t1 atgaaacaacggctagaacagaaatattgtgccaccccacgtcctgatgaaaacgtagaggaaggtttggtcactcgatc tacaaagagaacaggatctaagttcacatttacaaacaaaaaagatcagacgcgtaacaacgatttttggaggattgact ctggagcgaggctcatgataagagagatttcttatgcgtcgatgattacctcgtatctcgatagagttgtatcgaatgac gaacgagctgaagcacttcaagctcttagtcatgtgtttcattctatggctcatgtcacgtcccgaagtttggtatcttc agtgacatctcatagaggtttatacttgcaggatatggcctttaaaaatagtgcaactgaaaacaaactgcttacgttat ccacattggggtcctcacttttttatggaaaattctttgacattcttcactcgagtgcagagaatattcgagatgctaag gagacccagcatctacacaataccaaattctctgcaaacactagtaatgaagctagaaagagaaaacgggatgatgtttc taatgaaaaaactgatcatgtgtctcagtactcaaataagaagccccgatcagattctagttacactccgaacgggatag ggtcatctgataaatctaagcatcagttaaagcagcgaagttcgtattatacccctcgtcgtcagggaaacaattttcgc tcgggcttcgcccctcaaaaaagaaatgtagtggaactagttcccttgggccaggaaggccagggtttttacagtacgtt ttttgttgtaaagaaaaaagacgaaagataccgtccaattttgaatctccaggtgccccacttcaagatggagacacata aatcagttacagcaagtctacgaagaggcgaatgggcattcactctggacttgaaagatgcataccttcacattcctgta tttcaaccacatcggaagtgccaccgtttttgtgttcaagggcatcactaccaatttcgagcaatgccgtttggtttggc tacagctccccgaatattcaccaaagtgatgtcagcagtagggagttttctacactctcgtcaaatatttatacatatgt acctggacgattggttggtacgtcatcaggatgtggagacactactaaggcaccaggactttattttggaactattggac cgtctcggtctcattatgaattacgagaagtctcattttatgccaacgcggaaaattcagtatctgggagcatcgttcaa tctgcaatcaggcatcctttgcccatcaaaggaccggtacatgagtctgctccaggtaatttctactgtaaagtcacaaa ctcgtgttcctgctcaagtttttctccgattgctaggtttgatgacggcttgtttcgggaagaaccacattgtgttgaaa gcagctcatattccaggaaaaaggaatattatagcagacaatctgtcacggggaaaaacaacagttcgattgacagaatg gagcctgcatcagagcgtttgtcatagcgatccgtccggcgtccgtcgtgtgtctgtcgtaaacttttcacattttcgac ttcttttccagaacggcggaagggattttgatgagacttga |
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Protein
| Protein ID | pfu_aug1.0_16856.1_69012.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16856.1_69012.t1 MKQRLEQKYCATPRPDENVEEGLVTRSTKRTGSKFTFTNKKDQTRNNDFWRIDSGARLMIREISYASMITSYLDRVVSND ERAEALQALSHVFHSMAHVTSRSLVSSVTSHRGLYLQDMAFKNSATENKLLTLSTLGSSLFYGKFFDILHSSAENIRDAK ETQHLHNTKFSANTSNEARKRKRDDVSNEKTDHVSQYSNKKPRSDSSYTPNGIGSSDKSKHQLKQRSSYYTPRRQGNNFR SGFAPQKRNVVELVPLGQEGQGFYSTFFVVKKKDERYRPILNLQVPHFKMETHKSVTASLRRGEWAFTLDLKDAYLHIPV FQPHRKCHRFCVQGHHYQFRAMPFGLATAPRIFTKVMSAVGSFLHSRQIFIHMYLDDWLVRHQDVETLLRHQDFILELLD RLGLIMNYEKSHFMPTRKIQYLGASFNLQSGILCPSKDRYMSLLQVISTVKSQTRVPAQVFLRLLGLMTACFGKNHIVLK AAHIPGKRNIIADNLSRGKTTVRLTEWSLHQSVCHSDPSGVRRVSVVNFSHFRLLFQNGGRDFDET |
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