Gene
| Gene Model ID | pfu_aug1.0_1687.1_37083 |
|---|---|
| Locus | scaffold1687.1 : 47484 ... 56925 : - |
| To GenomeBrowser | scaffold1687.1:47484..56925 |
| Genes list of scaffold | scaffold1687.1 |
| Synonym | pfu_aug2.0_291.1_03957 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1687.1_37083.t1 | 1 | 1 | Caveolin | 28 | 137 | 1.5e-35 | 121.9 | 1.2e-39 | 1.8e-35 | 121.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1687.1_37083.t1 | gi|122131699|sp|Q00PJ9.1|CAV1_ATEAB | Caveolin-1 [Atelerix albiventris] | 3.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1687.1_37083.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1687.1_37083.t1 atggtgcaaatttatctgatgttaaatgatgctattgaatttgaagacctatacgaacgttcagattggggaccagaata catggtacagtttcatgacatcatcggtgaaccagaggaaggagttttctcatttgataaaatctggatctacagcttta agacctacaccaacaccaagctgtggtgttaccgtattaccacgttgatctgtggtataccagtgtcgttttgttgggga atatattttgcctgtctggccttcaacacaatctggatatgtattcccgccgtgaaggcatacaacctgaagttgcgctg tgcgaagggttgcttcgacagtcttctggaggcctttgtcaggccgtgttacgaggcatcgggatatatattctataaca taaggatttttaaaggacaagtcagagactga |
|
Protein
| Protein ID | pfu_aug1.0_1687.1_37083.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1687.1_37083.t1 MVQIYLMLNDAIEFEDLYERSDWGPEYMVQFHDIIGEPEEGVFSFDKIWIYSFKTYTNTKLWCYRITTLICGIPVSFCWG IYFACLAFNTIWICIPAVKAYNLKLRCAKGCFDSLLEAFVRPCYEASGYIFYNIRIFKGQVRD |
|