Gene
| Gene Model ID | pfu_aug1.0_16873.1_69018 |
|---|---|
| Locus | scaffold16873.1 : 1 ... 33619 : - |
| To GenomeBrowser | scaffold16873.1:1..33619 |
| Genes list of scaffold | scaffold16873.1 |
| Synonym | pfu_aug2.0_689.1_31062 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16873.1_69018.t1 | 1 | 1 | PARP | 104 | 166 | 2.8e-07 | 30.1 | 5.6e-10 | 1.7e-06 | 27.6 |
| pfu_aug1.0_16873.1_69018.t1 | 1 | 1 | VIT_2 | 219 | 287 | 6.0e-14 | 51.2 | 3.7e-17 | 1.1e-13 | 50.4 |
| pfu_aug1.0_16873.1_69018.t1 | 1 | 1 | VIT | 221 | 337 | 1.0e-30 | 105.8 | 5.9e-34 | 1.8e-30 | 105.0 |
| pfu_aug1.0_16873.1_69018.t1 | 1 | 1 | Actin | 587 | 641 | 2.0e-08 | 33.1 | 1.2e-11 | 3.4e-08 | 32.3 |
Transcript
| Transcript ID | pfu_aug1.0_16873.1_69018.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16873.1_69018.t1 atgataatggaatttggcatgttggacacccagaagttatcatctcctgttgaagaactaatggaacatatttggacgga ggctagtggaaggattgatgaaatcatcagcgtttcgctgcagaatatcaaagtagaacaggtggagaaagcagaagcca ttttgattcagttaaaggaacacatgaaaggggaacaggatcacatcaaagttacatcattgtttgacgagttttattcc gctttaccacacagacccgcttacaaaattcacgagctgagcccaaggtggctcgctcaaaagcaagatgtctgccaggt tgccctcggtaactgtatggactaccacacccatcaacatgaccttaatgccccgcccgaaggttatcacagcgtacatg gtgtggctagaactcctgaccaagactcagattttaaggacgatgagtatgtgatttataagacagatcagcagagaatg tgttacttggtagaattcacactaccaggggacgagcttcaaagtatagaagtgatgaaaaatgctacggaaaaaatctc tttgaaagatgaagaggatataatcgacatcagtgacgtaaaggacgtgaaggacccgatggacaaggtgaagccaggac tggtgtctaacgatgatacgcctgtagagctgaaggcggtccatgttagagctaaactgatagacctggctgctgaggtt gttgtactgcagcactactataatggtagttcacaagctctagaggccaagtatgtctttcccctcgatgacatggctgc cgtttgtggatttgaggccttcattaatggtaaacatatcgttggggaagtgaaggaaaaagagacggcacacaaagaat acaagaaggccatcagcgagggacatggagcatacctcatggaccaggatgaagaaacaccggaggtattcacagtgagt gtgggtaacctacctccccaggccactgttctcatcaagatcacctatgtcacagaactacaggtagaagacgaactcat taacttcaggttaccaggcagcgtggcgccatggaaacagaaatacaaagactcggcagttcttgctgataagcacactg acacaaaggcagtgatagagatgttaccaagacaacaaatggacgacagtttccaagtcttgattggattggccgaaatt cacgttcccagaatgtgggtggagactgaagaagataatgaagattcacaggtacgtaatgaaggaatcatgtatttgat catgctgtatgaattaaggcatagggctgtgcaattttattgtcatatcggtgcaccgcgatattttcgtttccaatatg taccgaggggtgacacattgaggtgtgaagattatgaagatgcaaagtcttacgcaggagaggaagagggatcaggctat ttaatgggtagttgttgtgccacaagatctgaagattcatctgatggtgaggaatatgaaagtttcggtggtatggagga agatggttatgattcatcatctgatgccagggaagaagaaggtagaaagggtaagaagatgatgagaagaatggttgaag aatcggagttatctgatagcgagatagatgacatttactgtgaagatgaagatgaggtagagtttgattcagctccatta gcaacgttaagtgccgcaccatttgaaacctccgaggcacgcatttgccgtgaagaaaagaggatggactttgaggagga tgaggcgcctatagttatggatatggggtcgttgtttatgaaggcaggttttgccggggctgaggctccacaggcggaat tcgagacggtactgggcagaccacgtcatcaaggtgtcatggtgggaatgggacagaaagatagctatgtgggcaaagaa gtcactggaggtaaaccaagaatcggaaaagttgttgaacatactgaagtggaagaagaagaacctgatacggctaaaat agctgtggatacccctgagcttaaagtagctggcaaaatgcacttaatgtatgaactatccaagctgatgaccaaagtct gccgcatataa |
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Protein
| Protein ID | pfu_aug1.0_16873.1_69018.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16873.1_69018.t1 MIMEFGMLDTQKLSSPVEELMEHIWTEASGRIDEIISVSLQNIKVEQVEKAEAILIQLKEHMKGEQDHIKVTSLFDEFYS ALPHRPAYKIHELSPRWLAQKQDVCQVALGNCMDYHTHQHDLNAPPEGYHSVHGVARTPDQDSDFKDDEYVIYKTDQQRM CYLVEFTLPGDELQSIEVMKNATEKISLKDEEDIIDISDVKDVKDPMDKVKPGLVSNDDTPVELKAVHVRAKLIDLAAEV VVLQHYYNGSSQALEAKYVFPLDDMAAVCGFEAFINGKHIVGEVKEKETAHKEYKKAISEGHGAYLMDQDEETPEVFTVS VGNLPPQATVLIKITYVTELQVEDELINFRLPGSVAPWKQKYKDSAVLADKHTDTKAVIEMLPRQQMDDSFQVLIGLAEI HVPRMWVETEEDNEDSQVRNEGIMYLIMLYELRHRAVQFYCHIGAPRYFRFQYVPRGDTLRCEDYEDAKSYAGEEEGSGY LMGSCCATRSEDSSDGEEYESFGGMEEDGYDSSSDAREEEGRKGKKMMRRMVEESELSDSEIDDIYCEDEDEVEFDSAPL ATLSAAPFETSEARICREEKRMDFEEDEAPIVMDMGSLFMKAGFAGAEAPQAEFETVLGRPRHQGVMVGMGQKDSYVGKE VTGGKPRIGKVVEHTEVEEEEPDTAKIAVDTPELKVAGKMHLMYELSKLMTKVCRI |
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