Gene
Gene Model ID | pfu_aug1.0_16905.1_25558 |
---|---|
Locus | scaffold16905.1 : 1373 ... 11075 : - |
To GenomeBrowser | scaffold16905.1:1373..11075 |
Genes list of scaffold | scaffold16905.1 |
Synonym | pfu_aug2.0_2553.1_12203 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | tyrosinase-like protein 10 |
Description | NCBI BLASTP best hit to P86952 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_16905.1_25558.t1 | 2 | 1 | Tyrosinase | 22 | 37 | 4.5e-34 | 118.5 | 0.46 | 6800.0 | -3.1 |
pfu_aug1.0_16905.1_25558.t1 | 2 | 2 | Tyrosinase | 114 | 312 | 4.5e-34 | 118.5 | 3.0e-38 | 4.5e-34 | 118.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_16905.1_25558.t1 | gi|353558891|sp|P86952.1|TYRO_PINMA | Tyrosinase-like protein [Pinctada maxima] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
mantleEdge | 2 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_16905.1_25558.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16905.1_25558.t1 atgttaatacaggacacaaacaagaatgataccaaaagtacatacgccgcctgtttccgaagtcagtcccaaaatagtga accgaccacaccggattgtgtcaaggcatttataatgtacgcacaggacctggcaaaaatcttcaacttcaaagaggagg aaatcaactacctctggtcactagagcgggagactcagtctatgttttacaaccaccatcggaggaaacgtcaggctgtc ttcttacccgtcagaaaggaatgtcggcttctcagtcaatatgaaagacagaatttgttttatgcgatacggtccctgaa gatggatactagcaacccgaacgagtatgacacgttggccaatcttcatcgcggagattcatttcaacctcatgcccatg acggctctaactttcttggttggcacagggtctacttgatgtactacgaaagggcattgcgtcgaagaagagcgggtgtg acgctgtgtttctgggacaccacaatggaatttaaccttggaatggaaaattgggcagaaacggcagttttctcctccga ctttttcgggaacagaagacagattgttacaactggacctttcagggactggcctttaccaccaggcctcgattttgctt ttcttactagaaacttgagtatacaaggagggatgccatttgatagtcgagcagcatacagtattttctacaatccaaac accattattcattccacagtgacagatcaagggtttggattcgacactatcaccaacaggctaggagaaacacgaaatgt tacaatagaaggtgaacataacaatgtacataactgggtgggaggggtcatgggaattttagaccccgctcctcaggatc ctatattcttcttccatcattgctacattgattacgcatgggaaaggttccgggagaaaatgaaaagatatggtcgtgat ccgacaacggactatccgggtcacggggttgaggccgatctgcatgatgcaaattacccaatgatcggatttgaatggta cagaaacatcgacggttattctgattttttcacacagaacgtatacaggtacgagtcgcccacttgtcaggcatgctaca actctccctataccgtatgtggaccggaaaatcagtgcattgcacgaatgaactatccaggcatggagattgaccaaggc ccaccaagtcaaagtgccccttatgtcgctctaagtgcccaagctggggcaacagcgtttgcgtcgtcttctggtagacg cttcgtcgctacatncaaattcggaataaataccttgaaatcttactaa |
Protein
Protein ID | pfu_aug1.0_16905.1_25558.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16905.1_25558.t1 MLIQDTNKNDTKSTYAACFRSQSQNSEPTTPDCVKAFIMYAQDLAKIFNFKEEEINYLWSLERETQSMFYNHHRRKRQAV FLPVRKECRLLSQYERQNLFYAIRSLKMDTSNPNEYDTLANLHRGDSFQPHAHDGSNFLGWHRVYLMYYERALRRRRAGV TLCFWDTTMEFNLGMENWAETAVFSSDFFGNRRQIVTTGPFRDWPLPPGLDFAFLTRNLSIQGGMPFDSRAAYSIFYNPN TIIHSTVTDQGFGFDTITNRLGETRNVTIEGEHNNVHNWVGGVMGILDPAPQDPIFFFHHCYIDYAWERFREKMKRYGRD PTTDYPGHGVEADLHDANYPMIGFEWYRNIDGYSDFFTQNVYRYESPTCQACYNSPYTVCGPENQCIARMNYPGMEIDQG PPSQSAPYVALSAQAGATAFASSSGRRFVATXKFGINTLKSY |