Gene
| Gene Model ID | pfu_aug1.0_16905.1_25558 |
|---|---|
| Locus | scaffold16905.1 : 1373 ... 11075 : - |
| To GenomeBrowser | scaffold16905.1:1373..11075 |
| Genes list of scaffold | scaffold16905.1 |
| Synonym | pfu_aug2.0_2553.1_12203 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | tyrosinase-like protein 10 |
| Description | NCBI BLASTP best hit to P86952 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16905.1_25558.t1 | 2 | 1 | Tyrosinase | 22 | 37 | 4.5e-34 | 118.5 | 0.46 | 6800.0 | -3.1 |
| pfu_aug1.0_16905.1_25558.t1 | 2 | 2 | Tyrosinase | 114 | 312 | 4.5e-34 | 118.5 | 3.0e-38 | 4.5e-34 | 118.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16905.1_25558.t1 | gi|353558891|sp|P86952.1|TYRO_PINMA | Tyrosinase-like protein [Pinctada maxima] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 2 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16905.1_25558.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16905.1_25558.t1 atgttaatacaggacacaaacaagaatgataccaaaagtacatacgccgcctgtttccgaagtcagtcccaaaatagtga accgaccacaccggattgtgtcaaggcatttataatgtacgcacaggacctggcaaaaatcttcaacttcaaagaggagg aaatcaactacctctggtcactagagcgggagactcagtctatgttttacaaccaccatcggaggaaacgtcaggctgtc ttcttacccgtcagaaaggaatgtcggcttctcagtcaatatgaaagacagaatttgttttatgcgatacggtccctgaa gatggatactagcaacccgaacgagtatgacacgttggccaatcttcatcgcggagattcatttcaacctcatgcccatg acggctctaactttcttggttggcacagggtctacttgatgtactacgaaagggcattgcgtcgaagaagagcgggtgtg acgctgtgtttctgggacaccacaatggaatttaaccttggaatggaaaattgggcagaaacggcagttttctcctccga ctttttcgggaacagaagacagattgttacaactggacctttcagggactggcctttaccaccaggcctcgattttgctt ttcttactagaaacttgagtatacaaggagggatgccatttgatagtcgagcagcatacagtattttctacaatccaaac accattattcattccacagtgacagatcaagggtttggattcgacactatcaccaacaggctaggagaaacacgaaatgt tacaatagaaggtgaacataacaatgtacataactgggtgggaggggtcatgggaattttagaccccgctcctcaggatc ctatattcttcttccatcattgctacattgattacgcatgggaaaggttccgggagaaaatgaaaagatatggtcgtgat ccgacaacggactatccgggtcacggggttgaggccgatctgcatgatgcaaattacccaatgatcggatttgaatggta cagaaacatcgacggttattctgattttttcacacagaacgtatacaggtacgagtcgcccacttgtcaggcatgctaca actctccctataccgtatgtggaccggaaaatcagtgcattgcacgaatgaactatccaggcatggagattgaccaaggc ccaccaagtcaaagtgccccttatgtcgctctaagtgcccaagctggggcaacagcgtttgcgtcgtcttctggtagacg cttcgtcgctacatncaaattcggaataaataccttgaaatcttactaa |
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Protein
| Protein ID | pfu_aug1.0_16905.1_25558.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16905.1_25558.t1 MLIQDTNKNDTKSTYAACFRSQSQNSEPTTPDCVKAFIMYAQDLAKIFNFKEEEINYLWSLERETQSMFYNHHRRKRQAV FLPVRKECRLLSQYERQNLFYAIRSLKMDTSNPNEYDTLANLHRGDSFQPHAHDGSNFLGWHRVYLMYYERALRRRRAGV TLCFWDTTMEFNLGMENWAETAVFSSDFFGNRRQIVTTGPFRDWPLPPGLDFAFLTRNLSIQGGMPFDSRAAYSIFYNPN TIIHSTVTDQGFGFDTITNRLGETRNVTIEGEHNNVHNWVGGVMGILDPAPQDPIFFFHHCYIDYAWERFREKMKRYGRD PTTDYPGHGVEADLHDANYPMIGFEWYRNIDGYSDFFTQNVYRYESPTCQACYNSPYTVCGPENQCIARMNYPGMEIDQG PPSQSAPYVALSAQAGATAFASSSGRRFVATXKFGINTLKSY |
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