Gene
| Gene Model ID | pfu_aug1.0_1691.1_58639 |
|---|---|
| Locus | scaffold1691.1 : 245 ... 13685 : - |
| To GenomeBrowser | scaffold1691.1:245..13685 |
| Genes list of scaffold | scaffold1691.1 |
| Synonym | pfu_aug2.0_549.1_30905 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1691.1_58639.t1 | 3 | 1 | Med12-LCEWAV | 153 | 248 | 1.5e-29 | 102.8 | 8.1e-26 | 6.0e-22 | 77.7 |
| pfu_aug1.0_1691.1_58639.t1 | 3 | 2 | Med12-LCEWAV | 262 | 298 | 1.5e-29 | 102.8 | 3.6e-10 | 2.7e-06 | 26.1 |
| pfu_aug1.0_1691.1_58639.t1 | 3 | 3 | Med12-LCEWAV | 326 | 364 | 1.5e-29 | 102.8 | 0.039 | 290.0 | -0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1691.1_58639.t1 | gi|326926276|ref|XP_003209328.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1691.1_58639.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1691.1_58639.t1 atgtacagtgtatccatctttccttcttattttgtagcatggatcagccagaaatcagaacatcaaccaagaaaagaatt tatatcagtgctcaacaagaagcaagaaatcaacaccttccaggatactacaaagaaaaaacaacagccaactaaggact atttctggccggtaagtcgtttctcgcaagagtggtgtcaagccataacaaagtacctgaaggaccagttacagaagatt caggagcccctgggaggggcaggtgccacgtctagcttccttaccgtgtctcagccagaccccaaccaggccctcaaaca gtggcactatgtcactaaattagcccaccacatgtatgatgaaggtttggtagacagacatgagtttttgagctggttga ttgacatgctggagaagatgaaacaaagtgaagacacggtgctcaaacttctcctgaaccaagttttacttccatttgtt agtgatgagcccattatacatctgctgatagactgggctgtgagcacacggcgctgtggtaactatagagccgtagtcgt ggctaaactcctagaaaaacgacagaatgaacttaggaatgaggaccttgaccttctggaatgtgaaggtgatatgggtg atgatgtcatggtaacatcagaaacacccttcttccagaacgtattgatgagttaccttgacgataaagctccgactcta gcttctgtaaagtctataaagtcagaaaaggaccagaacataccgagtgtacagcccaaccatgaggtcccttccacacc caaaggtccctcccgacacatgctgtatgcccaacacttcccaatcccccaggaggagtcaggacacgagtgtaatcaga ggatggtggtactgtacggagtggggaaggccagggatgacgcacatcaagtcattaagaagatagaaaaatcagccctc aaaatgttccacaaacggaaatgtattgacactagcagtgctgatgccaccatgtcgaagcccaaacaaaataatgaagc caaatttgagagtgttttcagcaagtttcagaagctgtcgtaccatgaccagtattatgtgaccactcagtgtaagaatg tggtattggaccatatagggaacttcctggctggtagctctacttacataccctatgtggaaaacgtctcctatctcttt gacatgatggaatactccctgaatatttatggtttattggatttttctgttcagttactgaaggacctaagtaatgtaga ggagatgctgagtgaacagaactccagtctttgtggtagttataccacgtcactctgtctctgtatcgttggaatattca gaaagtaccactcctatctactggtctcacaagatcttactatcatggcatttgaagggttaataggtgtagttaagaaa gtgtgtaatccttcagactgttcttcatcagagaggtgtatactggcctatctatatgatgcttatacctcatgtagtta tcttagggagaagttccaggatatgtttagtaatgcatacaggaagatgaagatgacgttatacgccaccattacaccat cggcatctaacaaactatgggatccaagcttcatggttgattgccttaataacatcaatatcaagtgtgtacattttctt tgtatattatctgatgcaattttctag |
|
Protein
| Protein ID | pfu_aug1.0_1691.1_58639.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1691.1_58639.t1 MYSVSIFPSYFVAWISQKSEHQPRKEFISVLNKKQEINTFQDTTKKKQQPTKDYFWPVSRFSQEWCQAITKYLKDQLQKI QEPLGGAGATSSFLTVSQPDPNQALKQWHYVTKLAHHMYDEGLVDRHEFLSWLIDMLEKMKQSEDTVLKLLLNQVLLPFV SDEPIIHLLIDWAVSTRRCGNYRAVVVAKLLEKRQNELRNEDLDLLECEGDMGDDVMVTSETPFFQNVLMSYLDDKAPTL ASVKSIKSEKDQNIPSVQPNHEVPSTPKGPSRHMLYAQHFPIPQEESGHECNQRMVVLYGVGKARDDAHQVIKKIEKSAL KMFHKRKCIDTSSADATMSKPKQNNEAKFESVFSKFQKLSYHDQYYVTTQCKNVVLDHIGNFLAGSSTYIPYVENVSYLF DMMEYSLNIYGLLDFSVQLLKDLSNVEEMLSEQNSSLCGSYTTSLCLCIVGIFRKYHSYLLVSQDLTIMAFEGLIGVVKK VCNPSDCSSSERCILAYLYDAYTSCSYLREKFQDMFSNAYRKMKMTLYATITPSASNKLWDPSFMVDCLNNINIKCVHFL CILSDAIF |
|