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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_16962.1_32754
Locus scaffold16962.1 : 8449 ... 19365 : -
To GenomeBrowser scaffold16962.1:8449..19365
Genes list of scaffold scaffold16962.1
Synonym pfu_aug2.0_289.1_30565

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_16962.1_32754.t1 1 1 ELO 10 105 5.3e-24 84.8 1.3e-27 6.4e-24 84.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_16962.1_32754.t1 gi|332020335|gb|EGI60757.1| 1.0e-24

Transcript
Transcript IDpfu_aug1.0_16962.1_32754.t1
Definition-
>pfu_aug1.0_16962.1_32754.t1
atggggaagctcgtacctttaaatatgcgagcctggttgagtagcagtaccaatagttttgtccatatagttatgtacct
atattatgccttggcggctataccagcctgtagaccttatctatggtggaaaaaatacatcacaaaattacaactgagtc
agtttttcatcattttatatcatactttacaaactggttttaccggctgtgatttccccatgtggtcacaaatattactg
acaagctacatgttattgctcatagtactctttggcaacttttacgtccaagcctacatcaagaaaaagcgggagtacaa
taggaaactagagagttcagagaagaatggctatatatctaatggaacaaatggcagagtatcaaacggacatcattaca
aaaatggcctaccaaatggtcacagcagcgacgtcctcaagaaagaaaattaa

Protein
Protein IDpfu_aug1.0_16962.1_32754.t1
Definition-
>pfu_aug1.0_16962.1_32754.t1
MGKLVPLNMRAWLSSSTNSFVHIVMYLYYALAAIPACRPYLWWKKYITKLQLSQFFIILYHTLQTGFTGCDFPMWSQILL
TSYMLLLIVLFGNFYVQAYIKKKREYNRKLESSEKNGYISNGTNGRVSNGHHYKNGLPNGHSSDVLKKEN

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