Gene
| Gene Model ID | pfu_aug1.0_17.1_14691 |
|---|---|
| Locus | scaffold17.1 : 21436 ... 30825 : - |
| To GenomeBrowser | scaffold17.1:21436..30825 |
| Genes list of scaffold | scaffold17.1 |
| Synonym | pfu_aug2.0_2425.1_18812 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17.1_14691.t1 | 1 | 1 | Abhydrolase_6 | 81 | 223 | 2.5e-15 | 57.0 | 1.2e-18 | 2.9e-15 | 56.7 |
| pfu_aug1.0_17.1_14691.t1 | 1 | 1 | Abhydrolase_1 | 104 | 211 | 6.0e-07 | 29.2 | 7.2e-10 | 1.8e-06 | 27.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17.1_14691.t1 | gi|156376954|ref|XP_001630623.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_17.1_14691.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17.1_14691.t1 atgaataatggatccttggagaaagcccactcagccaaaaaaagtcctggattttgtaaaaatttatgcaaggctttcca gattgttatcttgatagttttgattccacctttcctgaactatgcagcactccaaaaagaacaagcagaactacgaccta ttaaaggtgagctttatgacattggatgggaacagaaactgttcaaaatgtgtcagggaaaaggacctcctactgttgta tttgattctcctatcggaatgaactcggatgtatgggcacacatatggcctgctatagcaaaaaatgcaagagtgtgtat atatgacagagcaggcctagggttcagtgacagacctaaggagaattccacagactcagatggaacagaaatgaaaagta atcttcagaacaaatggagtccttttactgtagagaggatggccgatgatctatacagactaatgtctcaaagcagccag gaaccacaacccttcctgatagtaggtgcagagttgggagccttggtagcacagttctatgcacaaatgtttgataatca ggttctgggtatagtactgatcaatccactgtcagaggacctgtttgaacaagatggaggttcatggctacattactggt acagccaattaattcccagtttccagagcctacagttgagcgctgcattaggaattacacgtcttgccctgatactaggc ctgatttctcacccaatggcaaaatcaggaatgccagaggatgttgaaaacagacagaaatttctcctttgccatccaag acatttaagttcagtggtagatgaacatcattttatgaacatatctttttcacagttgagaacaattcgccttctgaaga gtttacctactaacatatctgttacagttttaagtggcaattattatgatgagcaaatgcctagttatttaaacaaggca tgggccaagtcagagcagaatttgataaacaagcattatccccaggccaatcatattgttataaacagttcagacagaca tatgcttatcaaaaattatgatgcaattatagaacaaatcaataaaatcattagactttataaaagtaaattaaaatcaa gaaaattctaa |
|
Protein
| Protein ID | pfu_aug1.0_17.1_14691.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17.1_14691.t1 MNNGSLEKAHSAKKSPGFCKNLCKAFQIVILIVLIPPFLNYAALQKEQAELRPIKGELYDIGWEQKLFKMCQGKGPPTVV FDSPIGMNSDVWAHIWPAIAKNARVCIYDRAGLGFSDRPKENSTDSDGTEMKSNLQNKWSPFTVERMADDLYRLMSQSSQ EPQPFLIVGAELGALVAQFYAQMFDNQVLGIVLINPLSEDLFEQDGGSWLHYWYSQLIPSFQSLQLSAALGITRLALILG LISHPMAKSGMPEDVENRQKFLLCHPRHLSSVVDEHHFMNISFSQLRTIRLLKSLPTNISVTVLSGNYYDEQMPSYLNKA WAKSEQNLINKHYPQANHIVINSSDRHMLIKNYDAIIEQINKIIRLYKSKLKSRKF |
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