Gene
| Gene Model ID | pfu_aug1.0_17.1_14694 |
|---|---|
| Locus | scaffold17.1 : 74826 ... 82425 : + |
| To GenomeBrowser | scaffold17.1:74826..82425 |
| Genes list of scaffold | scaffold17.1 |
| Synonym | pfu_aug2.0_524.1_14258 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17.1_14694.t1 | 1 | 1 | UBA | 145 | 181 | 4.0e-07 | 29.6 | 1.2e-09 | 1.3e-06 | 28.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17.1_14694.t1 | gi|241999522|ref|XP_002434404.1| | ubiquilin 1,2, putative [Ixodes scapularis] | 3.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_17.1_14694.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17.1_14694.t1 atgtttgccggtaatccacaactattacaacaagttcaatcacagatgccatccatgttagaacagatgcagaatccaca gatgcagcagttatttaccaaccctgaggctctgaatgccataatgcagatacagcagggcatgagtacattacagagac aggcccctacactatttcctggtttaaatcctggtgctcctggtactacatctgcagtttctacaaccagccagtctagt tcaacttctactactagcactacaactgcaagtactacagagacgaccacagctacagggacgacgcccaccaccagcac ccccacaaacacctccacatcaccacagaacccggaccaactctctaacctcatgtcacatatgatgcagatgatggctg caggaaacattaatcagcccccagaacaaagatatgcacaacaactagatcatttagctagtatgggatttatggacaga gaagcaaacatacgagcattacaagcaacaatgggagacgttaatttggcaatagacaggttattacaacagcgatga |
|
Protein
| Protein ID | pfu_aug1.0_17.1_14694.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17.1_14694.t1 MFAGNPQLLQQVQSQMPSMLEQMQNPQMQQLFTNPEALNAIMQIQQGMSTLQRQAPTLFPGLNPGAPGTTSAVSTTSQSS STSTTSTTTASTTETTTATGTTPTTSTPTNTSTSPQNPDQLSNLMSHMMQMMAAGNINQPPEQRYAQQLDHLASMGFMDR EANIRALQATMGDVNLAIDRLLQQR |
|