Gene
| Gene Model ID | pfu_aug1.0_17.1_14696 |
|---|---|
| Locus | scaffold17.1 : 104517 ... 114665 : - |
| To GenomeBrowser | scaffold17.1:104517..114665 |
| Genes list of scaffold | scaffold17.1 |
| Synonym | pfu_aug2.0_524.1_14260 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17.1_14696.t1 | 4 | 1 | Laminin_G_2 | 5 | 102 | 5.2e-34 | 117.0 | 8.4e-15 | 2.1e-11 | 43.9 |
| pfu_aug1.0_17.1_14696.t1 | 4 | 1 | Laminin_G_1 | 5 | 104 | 1.3e-31 | 109.3 | 7.6e-15 | 1.9e-11 | 44.1 |
| pfu_aug1.0_17.1_14696.t1 | 2 | 1 | Laminin_G_3 | 6 | 100 | 2.0e-10 | 41.1 | 1.1e-05 | 0.028 | 14.6 |
| pfu_aug1.0_17.1_14696.t1 | 2 | 2 | Laminin_G_3 | 138 | 265 | 2.0e-10 | 41.1 | 6.0e-10 | 1.5e-06 | 28.5 |
| pfu_aug1.0_17.1_14696.t1 | 4 | 2 | Laminin_G_2 | 169 | 298 | 5.2e-34 | 117.0 | 6.8e-24 | 1.7e-20 | 73.3 |
| pfu_aug1.0_17.1_14696.t1 | 4 | 2 | Laminin_G_1 | 183 | 300 | 1.3e-31 | 109.3 | 4.4e-19 | 1.1e-15 | 57.8 |
| pfu_aug1.0_17.1_14696.t1 | 4 | 3 | Laminin_G_2 | 1389 | 1414 | 5.2e-34 | 117.0 | 0.29 | 710.0 | 0.2 |
| pfu_aug1.0_17.1_14696.t1 | 4 | 3 | Laminin_G_1 | 1390 | 1448 | 1.3e-31 | 109.3 | 0.017 | 41.0 | 4.1 |
| pfu_aug1.0_17.1_14696.t1 | 4 | 4 | Laminin_G_1 | 1492 | 1557 | 1.3e-31 | 109.3 | 0.082 | 200.0 | 1.9 |
| pfu_aug1.0_17.1_14696.t1 | 4 | 4 | Laminin_G_2 | 1493 | 1545 | 5.2e-34 | 117.0 | 0.026 | 63.0 | 3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17.1_14696.t1 | gi|291220882|ref|XP_002730452.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_17.1_14696.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17.1_14696.t1 atggccaaaggacaaacggactggctattgctgagaatgacctccggacagctgatgttacagggggacttcggatcagg atcttggcttgtcacctcagacccgggccctggtctggacgatctgacttggcatcacgtggttatatcacaaagcggta agaccatggctctcagtgtggacactaggacttacaacggctcgctccccgggggtatgacccaacttaatgagaacgag gtattggtagggggattcgggaactggaagaacttccgcgggtgtataactaacgtgattttcaatagatacaacatcct caatcatgcacagcagttgaataattcggatttagtgaagcatgtaacatgggactgcagtgaagaattcacagctccgt caaatgaacccatctatttcaaagacgatcagtcctacctggctttacctggcttgacaataaccacaaccgggtctctg tactttgacgtcaaaactttatctcaaactacgtttttagttattagtttatcgacaaatctgacttattccgatgtttt ggcaatagaactcataaatggaaaaataaaacttaccgttaaccgagggggaggggacacctttatacgatctgccgtta ccgttaacgacaaccaatggcataacgttggtgttacgtttgagtcacagcgcgtcattctaactgttgatactgaaaga caacaaagcgcttttcatcgaaacagcaataacttcttcagattcgcagacaaattttatattgggggtttaacgaatga catcaggcaccatatttcaaaccaaaatttgctcgccgactcgaggataaccggaaactttagaggatgtgtcagaagtg tcaatgtcgagggaaacgatttagggttcaaagacgtagaggtcagcaatgagatagaggtaggatgcaagacggggcaa gtcgaaattgctccaaataatggtggaaccggtcacgtggatgaaagctcaaaccgcgaacgcccgttagtaagtgttgt tcctctcagggctcgggagggagaggaagtgacattaacaggaagtgttatccgtgtagtgtttgattatcgggcatata gaatacggcagtccgccatacaatttcgtatcacacagccgccagatcacggcagtatcgagatcgacagaagacgtagt aatgacgcgttcacgcttttagatcttatcggaaggaaagtgaaatacgcacacgacgggagtgaaaccgtaagtgacga agttgccatggagatggttattgtttccgatcttaaacttactctaatgaaaaagacaggaatccgtcttgtccatggca gtttctctttgatacaaccagaaaaccttactgtaagcacgaatctaccataccagaatttagatattcagtacgtaatt agcagaaatcctagatatggagaaattcagaaaaatgacaacggcatatggacaactatcacacgatttacacaggaaga catagagaagggaaatattcggtatacgaattccagatctgttcattccactccgtacgaccagttttcattcacagtta gatgtttgaccaaatcgcttgaccagactccgttcttcattcaaatagaaagacaagctttaaatgtgaattttgcaagg tctataaatctgtcaaggaaggattacaaagtactcagtaaagctgaacttcatgctcaaacaaacgacaaaatgacgtc agacgttcagataaggtttatgatactcagacctcccgtttatggaagtatctaccgagttcataaaacgaaagcggacc cggacttactgtcagatctacaacctttacagcgtgacgaacacttcacacaggatgacgtaaataacggctacgtcatc tacaaattgaagagttcaacatcgagacggacgggagacttcgttgatctgagtgtagaatccggttccgctgttccgaa aaggataagaatttactttgattacactccccctgtctctgcggtacgattcacaaacaatggactgaagactgttatag agggccgacagcgtactatagaaaggtccgatctatacttggaaacaaatgattactctgaatttgaatttgatgtcatt gatttcccggagcacggagaactacaattggtcattcctagaacttcacatgtagaaagtcgtaatgtatcaaagttcac aaaccaagatatccgtaatttaaagttagtgtacgaacatgatgattccgagagtgatactgatcgttttactttcatag cgtcaccgatacttcagagtacggacgtgcttccgttaaaagtacaggaattcagcggcacatttcaaataaaaatcatt atgaggaatgataacgcacccaggagacccgtggacaagattttccatgttgttacaaatcaggaaaaagttatcaccct ggacgacctgtcgtgtacagatccggatatcaacttcgaccctatgaacctgctgtacacggtgggaagagttaggaatg gggatatcatcaataatgttaacaagagcgtcgttactcgtttcacgcaaaaagatattgctgatggaaaaataacattt agacatcgtggggccagggttggacgcattccatgttatgtcggcgacggtcaatataacacccagttcgtatttgaagt agaagccaccaatccctacttgagaatcgtaaataacactggcgtcgccgtcaaagcgtcacagagcgtctttatcaccg gtaacaatctaagcattgaaacaaacatgaatacggaaccaaaggacattcgctttattttagttcaagaaccgctgtat ggaaatcttgaactgatcggcgccaaggtaacagaattttctctccagataatcatggatggtgtattatcatatcgtca ccggggacaggggggtaatgaggatgtctttagatttgctgtttttgcaggacaggcaagggcgcagtcatcttttgtca tacacatatttcaaacaacccaaaatgttccacctcgaatcgttcacaactccattttagaagtacccgagctaggcttt tctactttgacaaccaataatctacaggtgacacacccaaatagtcccccatcctccatcatttacactgtaacagctcc tcccagtcacggacggctgcgggtacagggtagataccaccgtcagggggaccacgcccatcagacattcacacaggaga acattgatcaaggtcatatcagctatcaccactcagactttaacccgtctgcagattcttttgtgtttgatgttacaaac ggtatgcagactttgaaggggttacagtttgctattgaaataattcctacaaggttagaattggaaattcagaacttcac agtgcaagaaggaatgagaaaagccctgactaagaacaacataaggctgaagtcacgttactatgacagagatgatgaag gaggatttatgttctatgttactgatgggaccaatacagaccataagagggagaacttcaacgtgttagcagaacctctc actctcacgttagttaaaaactctccactgaaagtctatccaggtagaggccataccatcactcctcaaaatctactcac caagaccaatgatctaaaccagaccaaacctataatataccatgtattacaaaaaccaaagaaaggcaggatcgtcacca tgtacaaagatagggcactggaagtgatgtcattcaagcaggaggacataaacgatggaaaaatcatatatcagcatgac gcatatctgacaaaatggactgattatgacaatttcacatttgaagttcgaactttgtacgctgcagatattcagaatat gatgttcaaaattcaaatatcgtatggtaattttcaaaaccagaatcagaatgatgatatacatgtagagggatttgttg tgcaggaaggagggagtcatgtcttatcgaaacagaatatagatgccaccaattatactcgacagcaggaaaataacgga aagcgagcaaggatctggtttagtctgctatccaagcctatgaatggagagctctataaaggaggtaggataatcagtag aggggatagattcttacaaagtgagattaatgatggtcagatcagctaccaacatgataattcagacaccagcaatgata gctttgtatttaatgtccatgttgaaatacagcaagctggaaagaaggaggttgaagtccaagaaatgaaaggaacattc tatatatcagttttacctctaaatgatcagcctttcagaattctctctgtcaatccagtgatacaagtagtagagggaat gagtacggtcgtgtcaagtgatattctgaagacagtagacttggacacaccaccagggggcattacttataatgtaaaga cgcttccgtcaaatggaattttgggatactctggcaattcaatgcagcaaatcagacaattcacacaaaaagatattgat gatggaaaagtaactttcactcagcatggtagcaaacagagggggagttttgaggtagaggtctcagatggcaagtttcc cgctaatagtacttcagtatcagtcagtgttgttcccatcacactacatgtaacgtctaatcgtaccatttacatcctac aggcagatacctcagtatatataacaaaggacaacttggacatatccacaaatggaaaccgtcaaaaaatacactatgaa ataaagattcctcctaagtatggccaaatattccagctagtgtaccctgtaactttcttcaagcaggtggacatagacaa gcgtaacattctgtatattcagaggaatttgtcatctcacatggattactttttctgtgacatttattatgaaggatcct cagccgtcctaagaaataagagagtcattgttatggtgaagccgctagtcaaacaacagccgatcacatcaactataggg ggaagaacacctgtaactacaaaaaatctggatgctagccaattggcaaacataacaggttacactccaagatataccat tattgaaagaccaaagtttggacacattgtgaagatcgtgcgttctagaagagacactaacggcagaagtcagtacaaag aggttgaccagtttacacatgaggatgtgctctatgttagaatatattacgttcctcaaaattttcagtttgtaagagaa gttgaggattcattctcatatttattgagttctcgaggtgtgcagccagctttagggaagatgacattaagagttgcccc ataccctggatacaccacgcctagaggaggtggtaggtcacattttgatcaaccaaatgcagacaaaaactctacattgt tctctgaggaaccagacagaggcgaaatagtcagtccaaacgtcagtcctgactttattataatactggctatactgatt ccactgtttgtgttagtgatatttatcatagttattgtctttatattgtggagacgacagaggtttagacgctattcacc accgggatcgggccatactcagagaaagtcacatttccgacccgatataagtggccctgtaacaatagaacagccacacg ttcacatacagctacaggacggcacgactgctccagacgacagccattccttattgtatgaacatcataattatctcaat gtaccaataaaaagcgatggcaaacattatgctaatgcagagataggtcaaggtcatagtgatgcagatgaccttgactc tgattctgataatgagagtaatgtgatttcacctttagttgatccagatatgacagaaattagtgctacagtaccggagt gtaaagtgactcctttattgggtgccaaaagaagaccaaagaaaaagactcaggatgtgatatggatctatttgactggt ccatga |
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Protein
| Protein ID | pfu_aug1.0_17.1_14696.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17.1_14696.t1 MAKGQTDWLLLRMTSGQLMLQGDFGSGSWLVTSDPGPGLDDLTWHHVVISQSGKTMALSVDTRTYNGSLPGGMTQLNENE VLVGGFGNWKNFRGCITNVIFNRYNILNHAQQLNNSDLVKHVTWDCSEEFTAPSNEPIYFKDDQSYLALPGLTITTTGSL YFDVKTLSQTTFLVISLSTNLTYSDVLAIELINGKIKLTVNRGGGDTFIRSAVTVNDNQWHNVGVTFESQRVILTVDTER QQSAFHRNSNNFFRFADKFYIGGLTNDIRHHISNQNLLADSRITGNFRGCVRSVNVEGNDLGFKDVEVSNEIEVGCKTGQ VEIAPNNGGTGHVDESSNRERPLVSVVPLRAREGEEVTLTGSVIRVVFDYRAYRIRQSAIQFRITQPPDHGSIEIDRRRS NDAFTLLDLIGRKVKYAHDGSETVSDEVAMEMVIVSDLKLTLMKKTGIRLVHGSFSLIQPENLTVSTNLPYQNLDIQYVI SRNPRYGEIQKNDNGIWTTITRFTQEDIEKGNIRYTNSRSVHSTPYDQFSFTVRCLTKSLDQTPFFIQIERQALNVNFAR SINLSRKDYKVLSKAELHAQTNDKMTSDVQIRFMILRPPVYGSIYRVHKTKADPDLLSDLQPLQRDEHFTQDDVNNGYVI YKLKSSTSRRTGDFVDLSVESGSAVPKRIRIYFDYTPPVSAVRFTNNGLKTVIEGRQRTIERSDLYLETNDYSEFEFDVI DFPEHGELQLVIPRTSHVESRNVSKFTNQDIRNLKLVYEHDDSESDTDRFTFIASPILQSTDVLPLKVQEFSGTFQIKII MRNDNAPRRPVDKIFHVVTNQEKVITLDDLSCTDPDINFDPMNLLYTVGRVRNGDIINNVNKSVVTRFTQKDIADGKITF RHRGARVGRIPCYVGDGQYNTQFVFEVEATNPYLRIVNNTGVAVKASQSVFITGNNLSIETNMNTEPKDIRFILVQEPLY GNLELIGAKVTEFSLQIIMDGVLSYRHRGQGGNEDVFRFAVFAGQARAQSSFVIHIFQTTQNVPPRIVHNSILEVPELGF STLTTNNLQVTHPNSPPSSIIYTVTAPPSHGRLRVQGRYHRQGDHAHQTFTQENIDQGHISYHHSDFNPSADSFVFDVTN GMQTLKGLQFAIEIIPTRLELEIQNFTVQEGMRKALTKNNIRLKSRYYDRDDEGGFMFYVTDGTNTDHKRENFNVLAEPL TLTLVKNSPLKVYPGRGHTITPQNLLTKTNDLNQTKPIIYHVLQKPKKGRIVTMYKDRALEVMSFKQEDINDGKIIYQHD AYLTKWTDYDNFTFEVRTLYAADIQNMMFKIQISYGNFQNQNQNDDIHVEGFVVQEGGSHVLSKQNIDATNYTRQQENNG KRARIWFSLLSKPMNGELYKGGRIISRGDRFLQSEINDGQISYQHDNSDTSNDSFVFNVHVEIQQAGKKEVEVQEMKGTF YISVLPLNDQPFRILSVNPVIQVVEGMSTVVSSDILKTVDLDTPPGGITYNVKTLPSNGILGYSGNSMQQIRQFTQKDID DGKVTFTQHGSKQRGSFEVEVSDGKFPANSTSVSVSVVPITLHVTSNRTIYILQADTSVYITKDNLDISTNGNRQKIHYE IKIPPKYGQIFQLVYPVTFFKQVDIDKRNILYIQRNLSSHMDYFFCDIYYEGSSAVLRNKRVIVMVKPLVKQQPITSTIG GRTPVTTKNLDASQLANITGYTPRYTIIERPKFGHIVKIVRSRRDTNGRSQYKEVDQFTHEDVLYVRIYYVPQNFQFVRE VEDSFSYLLSSRGVQPALGKMTLRVAPYPGYTTPRGGGRSHFDQPNADKNSTLFSEEPDRGEIVSPNVSPDFIIILAILI PLFVLVIFIIVIVFILWRRQRFRRYSPPGSGHTQRKSHFRPDISGPVTIEQPHVHIQLQDGTTAPDDSHSLLYEHHNYLN VPIKSDGKHYANAEIGQGHSDADDLDSDSDNESNVISPLVDPDMTEISATVPECKVTPLLGAKRRPKKKTQDVIWIYLTG P |
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