Gene
| Gene Model ID | pfu_aug1.0_170.1_36334 |
|---|---|
| Locus | scaffold170.1 : 48444 ... 55675 : - |
| To GenomeBrowser | scaffold170.1:48444..55675 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | pfu_aug2.0_219.1_30450 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Pif like protein |
| Description | Pif like protein, best hit to BLAST BAK86420.1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_170.1_36334.t1 | 1 | 1 | VWA | 14 | 175 | 7.0e-33 | 113.8 | 3.2e-36 | 9.5e-33 | 113.3 |
| pfu_aug1.0_170.1_36334.t1 | 1 | 1 | VWA_2 | 14 | 163 | 2.6e-16 | 60.2 | 1.1e-19 | 3.4e-16 | 59.8 |
| pfu_aug1.0_170.1_36334.t1 | 1 | 1 | Sushi | 193 | 242 | 3.8e-06 | 27.1 | 1.3e-09 | 3.8e-06 | 27.1 |
Transcript
| Transcript ID | pfu_aug1.0_170.1_36334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_170.1_36334.t1 atgctcaattttgtgcactattgatgtaaagctcagctggacctttgcatagtaatggatggttctgacagtatatctaa agaagacttccagatattaaggaatcttcttggtgatctgatagatcagctaaatataggaccaggtcaaggacgaatgg gaatcgtagtttacagtagacttttggcgatggatgttcccctgacgttcgataaagaagtgctgaagcgaatggcggca gacatgccacatcccagagaaggtacaaatactcatcttggaatccaaagaatgaaagaaatgttcagagatagtaatcg tccaaatgtgccaaaggttggtattgttgttacagacggcatctccaaagaacaaactttgacagcacgagaagctaacc tcaccaaagcacttggagtgaatatgttttcagtgggagtgggacctcccgagttcatggatgaggaggagctggacgcg attgcttcatatagtgatcaagtattgatggtggattcatttggaacgctggccaaagaaataggaaatcttgtcaagct tatttgtccagttgattgtggggagccaaggaaaatgccatttgcccagcttcttccaggacttacaacaaaaggggcgg ttagagagtaccggtgtaatccgggaactgttagagtggggaatacacatatcaaatgtctgcccacaggattttggact cttcaagatttctattgtaaagttcctccggctacacctccccctccaccaccaaagaaaggtctttgtgatggatgtgc aatgcagaatggtataggttatgctccccatcctgacgagtgtgacaagtacatcgaatgtgtgtttgatgacgctggtt ttgtccatccgtcatatagattttgtccatttgggcaatactgggagcaaagacaactgacttgtaaaccatcaatatcg gtgaactgcccaaaagtaaaatttcgattttcaagagagaattgtttatttcaggccggacattggaatgaaatgtacta ctcacatgacggcaaaacactcggtggtcaagtgaatggacttcggaacgaaatgtttgcaatgcttcctatacaaaaca aagagaccggaatccagattggatcagcgccaggctttcaaaactttcacgggtttttagactatgttacaatttactta tgtcgaccagactacaaatag |
|
Protein
| Protein ID | pfu_aug1.0_170.1_36334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_170.1_36334.t1 MLNFVHYXCKAQLDLCIVMDGSDSISKEDFQILRNLLGDLIDQLNIGPGQGRMGIVVYSRLLAMDVPLTFDKEVLKRMAA DMPHPREGTNTHLGIQRMKEMFRDSNRPNVPKVGIVVTDGISKEQTLTAREANLTKALGVNMFSVGVGPPEFMDEEELDA IASYSDQVLMVDSFGTLAKEIGNLVKLICPVDCGEPRKMPFAQLLPGLTTKGAVREYRCNPGTVRVGNTHIKCLPTGFWT LQDFYCKVPPATPPPPPPKKGLCDGCAMQNGIGYAPHPDECDKYIECVFDDAGFVHPSYRFCPFGQYWEQRQLTCKPSIS VNCPKVKFRFSRENCLFQAGHWNEMYYSHDGKTLGGQVNGLRNEMFAMLPIQNKETGIQIGSAPGFQNFHGFLDYVTIYL CRPDYK |
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