Gene
| Gene Model ID | pfu_aug1.0_170.1_36338 |
|---|---|
| Locus | scaffold170.1 : 76832 ... 89335 : - |
| To GenomeBrowser | scaffold170.1:76832..89335 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | pfu_aug2.0_219.1_30451 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_170.1_36338.t1 | 11 | 1 | Sushi | 47 | 96 | 0.0 | 252.3 | 7.8e-09 | 3.9e-05 | 23.9 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 2 | Sushi | 104 | 153 | 0.0 | 252.3 | 8.8e-11 | 4.3e-07 | 30.1 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 3 | Sushi | 161 | 210 | 0.0 | 252.3 | 1.6e-10 | 7.9e-07 | 29.3 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 1 | CBM_14 | 185 | 216 | 6.4e-07 | 29.2 | 0.9 | 4400.0 | -2.4 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 4 | Sushi | 218 | 264 | 0.0 | 252.3 | 1.1e-07 | 0.00056 | 20.1 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 2 | CBM_14 | 242 | 270 | 6.4e-07 | 29.2 | 0.041 | 200.0 | 1.9 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 5 | Sushi | 272 | 329 | 0.0 | 252.3 | 3.5e-08 | 0.00017 | 21.8 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 6 | Sushi | 329 | 378 | 0.0 | 252.3 | 7.4e-10 | 3.7e-06 | 27.1 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 7 | Sushi | 386 | 439 | 0.0 | 252.3 | 4.2e-12 | 2.1e-08 | 34.3 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 3 | CBM_14 | 407 | 442 | 6.4e-07 | 29.2 | 0.0022 | 11.0 | 6.0 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 8 | Sushi | 443 | 491 | 0.0 | 252.3 | 3.7e-09 | 1.8e-05 | 24.9 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 4 | CBM_14 | 467 | 498 | 6.4e-07 | 29.2 | 0.012 | 57.0 | 3.7 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 9 | Sushi | 500 | 549 | 0.0 | 252.3 | 3.1e-10 | 1.5e-06 | 28.4 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 5 | CBM_14 | 524 | 555 | 6.4e-07 | 29.2 | 0.056 | 280.0 | 1.5 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 10 | Sushi | 557 | 610 | 0.0 | 252.3 | 7.1e-13 | 3.5e-09 | 36.8 |
| pfu_aug1.0_170.1_36338.t1 | 11 | 11 | Sushi | 614 | 662 | 0.0 | 252.3 | 3.5e-09 | 1.7e-05 | 25.0 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 6 | CBM_14 | 635 | 668 | 6.4e-07 | 29.2 | 0.00056 | 2.8 | 7.9 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 7 | CBM_14 | 696 | 748 | 6.4e-07 | 29.2 | 1.3e-10 | 6.4e-07 | 29.2 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 8 | CBM_14 | 763 | 802 | 6.4e-07 | 29.2 | 1.4e-05 | 0.071 | 13.0 |
| pfu_aug1.0_170.1_36338.t1 | 9 | 9 | CBM_14 | 839 | 861 | 6.4e-07 | 29.2 | 0.015 | 74.0 | 3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_170.1_36338.t1 | gi|291226450|ref|XP_002733205.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_170.1_36338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_170.1_36338.t1 atgcttattttccccattacgcgtgtatatatatatttttcaaaaccagtcactgaaacctttcttgcacttacatattt ctacaaaaggacatgtatttacaatttgatacctttttcagatttcctgataactgactgtaaggagccattacctgttc caaatgccgtcataagacctggtggtacgcttgagggggcagtacgcacgtatgattgtgaacggacgactgtcctagaa ggagaccccaatgttttctgcggcaataacggacaatggtcaaagcataaattctattgtagaccggattgtggacaacc cgatttagtaccaagagcaacttatcaagttcagtcaacgttagagggtaacgttactagatataagtgtaaccctgaca ctgttcttgaaggagaacctatcgtcatttgtcaaagtaatggacaatggtctccacctgacttctactgtcgacccaac tgtggaaaacctctaaacattccaagagcatcaataccagatggacccacgttagaaggtagtacattggaatatcaatg tcataaaaataccattatggaaggcaaccctgttatagtatgtggacaagatggaaagtggtcagacagcaacctctact gtagacctgactgcggaatacctgtcccaataccaagagcttccattgcaaaaggttctacacttgaaggcaactctata caatatcaatgtgaccacaacactgtngattcatcgataacgtgcggtagagatggaaaatggtcgccaccttcctttta ttgtcgacctgattgtggaatcccaattgatgttccaaatgcaaaatggctccccggaccttccctggagggaagtgtta catcatataagtgcattggtaacacggtgatggaaggggaccctacatcatcatgtggaaaagatggaaaatggtcacat ccaaatttctattgtagacctgactgtggagtacctataaatgtgccccgagcagtcactcctaatggtcccactgtaga aggcagtagactagtctatgagtgccaaaagaagacgatcctagagggaaattcttccattatttgtgagagtaatggtc agtggacaagaccactgttttattgcaggcctgattgcggaataccaccagatgttcaaaacgcgataatggactctgga tcgactttagaggaagcatcacgatattatacatgcaaacctggtactgtcttggagggaaatgcagagattaaatgtgg aagcagtggccagtggtccaaacctcagtttcgctgcaaatatgattgtggagcaccagtcgtaatacctcgtgcgcatg ttgacgagggacttaccacagaaggcgctataagaacttacatgtgtaataatgggaccatcatggaaggatcatcaaca gtcacatgtcaagaagatggaacttggagtcctatctctttccagtgcaaacatgactgtggtgagccatatatgattcc aaatgcaattgtgagaccaggcccaacggttgaaggatctgttagacaataccaatgtgagaagggtactacgttagaag ggaatccagaaataagatgcaagaataacggaaaatggaccctaacaagtatacgttgtcgtcctgattgtggacctcca cctcatgtaccacgaaccactgtgagccatggtgcgacagtagagggtagtgtggctacttataaatgtgactcgcacac aacaatggaaggaaattcaaagattgtctgcaagaaaaatgggaagtggtccaagcctagtttacaatgtcgaacggact gcggagagcccatgtcagtgccttatgctgttttattacctggtccaacgacagagggtatgtccagatattacgaatgt agttctggttgtgaaactataggaaacccagaaattagatgcatggaagatggaaagtggacacaaatagaattttattg ccatgttgtatcacatccaggaccaaaacctccttcaacactagcacctgttcaaggaccatgtgacttctgtaagatgc agtatggagtgggattcaatcctcatccagaagattgtgacaagtttacccagtgttactttgatcaaaatggccaagtt caagctgtatttagacaatgcccctttggtcagtactgggaccaggatgtacttacatgtcggccgtctgagcaggtcca gtgtttgcacgaaaaatgtcacatgcccggacttttatcctatccttatggaaacaaaacaagttgcaaggccttctgga aatgtaatcttggtaaatcaataggcatgtgctgtcccgacggctacgcctatgactctcaccaaggatgtgtgcatgat cctgactgcaaggacacctgcccgcccctcgtatatcacgaaggggcgtgtgatacccgtccgtcatggaagaatccata tggatatcagcaattcattccagggttaggatggaaggaaatggaatgtgggagtgggtcaaagtatgactgtacatcat gcaaatgtgaataccatgaatcttttctaccaggaaaagtttgcaaaccggaaatcaacattgctttcgatgatgactgt ttcgatgactctgaccatcattacgaaatagaaaatcacaacataacattaaccgggggaggactggcgtattttaatgg aattaactctagacttgtgataccacatattgaaaaaatgaagcattatacagatctcgtggtacgcatgcgctacctag atgtcccggatgtaggacttcgcggattgattagtaacggtgaatatgactcaccgagcatgatgattgtcaagagtaaa aggaaccttcactatatggctaaatgcgaatcaaacagaattacatcattttatttaccaatgagtcctggtaactggaa tgatttaacatttatgcatgacactaagagactagaaggaaaagtgaataatgttagagcagagaaatgggcgtttggtc atatccaagttcttgattcagcattacagatcggctacgcccctggattccaaaatttccatggttatgtggactatgtc tctatatatctgtgtagaccagatgattag |
|
Protein
| Protein ID | pfu_aug1.0_170.1_36338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_170.1_36338.t1 MLIFPITRVYIYFSKPVTETFLALTYFYKRTCIYNLIPFSDFLITDCKEPLPVPNAVIRPGGTLEGAVRTYDCERTTVLE GDPNVFCGNNGQWSKHKFYCRPDCGQPDLVPRATYQVQSTLEGNVTRYKCNPDTVLEGEPIVICQSNGQWSPPDFYCRPN CGKPLNIPRASIPDGPTLEGSTLEYQCHKNTIMEGNPVIVCGQDGKWSDSNLYCRPDCGIPVPIPRASIAKGSTLEGNSI QYQCDHNTXDSSITCGRDGKWSPPSFYCRPDCGIPIDVPNAKWLPGPSLEGSVTSYKCIGNTVMEGDPTSSCGKDGKWSH PNFYCRPDCGVPINVPRAVTPNGPTVEGSRLVYECQKKTILEGNSSIICESNGQWTRPLFYCRPDCGIPPDVQNAIMDSG STLEEASRYYTCKPGTVLEGNAEIKCGSSGQWSKPQFRCKYDCGAPVVIPRAHVDEGLTTEGAIRTYMCNNGTIMEGSST VTCQEDGTWSPISFQCKHDCGEPYMIPNAIVRPGPTVEGSVRQYQCEKGTTLEGNPEIRCKNNGKWTLTSIRCRPDCGPP PHVPRTTVSHGATVEGSVATYKCDSHTTMEGNSKIVCKKNGKWSKPSLQCRTDCGEPMSVPYAVLLPGPTTEGMSRYYEC SSGCETIGNPEIRCMEDGKWTQIEFYCHVVSHPGPKPPSTLAPVQGPCDFCKMQYGVGFNPHPEDCDKFTQCYFDQNGQV QAVFRQCPFGQYWDQDVLTCRPSEQVQCLHEKCHMPGLLSYPYGNKTSCKAFWKCNLGKSIGMCCPDGYAYDSHQGCVHD PDCKDTCPPLVYHEGACDTRPSWKNPYGYQQFIPGLGWKEMECGSGSKYDCTSCKCEYHESFLPGKVCKPEINIAFDDDC FDDSDHHYEIENHNITLTGGGLAYFNGINSRLVIPHIEKMKHYTDLVVRMRYLDVPDVGLRGLISNGEYDSPSMMIVKSK RNLHYMAKCESNRITSFYLPMSPGNWNDLTFMHDTKRLEGKVNNVRAEKWAFGHIQVLDSALQIGYAPGFQNFHGYVDYV SIYLCRPDD |
|